RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 FLT1P17948 1338 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 RCCD1A6NED2 376 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 NBPF7P0C2Y1 421 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 SUPT20HL2P0C7V6 817 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 TNFAIP2Q03169 654 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 SEPT2Q15019 361 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 CNKSR3Q6P9H4 555 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 ARMCX2Q7L311 632 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 DHX36Q9H2U1 1008 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 ABHD16BQ9H3Z7 469 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 CDV3Q9UKY7 258 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 V9GY48 417 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-216ENST00000519489 CNOT1A5YKK6 2376 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 ABHD14A-ACY1A0A1B0GW23 586 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 FLOT1O75955 427 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 ASGR2P07307 311 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 RFX5P48382 616 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 COPS2P61201 443 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 SHC2P98077 582 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 FKBP5Q13451 457 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 HIC1Q14526 733 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 LAPTM4AQ15012 233 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 N4BP2L1Q5TBK1 243 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 CCDC102BQ68D86 513 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 ADGRA1Q86SQ6 560 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 CLEC10AQ8IUN9 316 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 SPICE1Q8N0Z3 855 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 EFHBQ8N7U6 833 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 RETREG2Q8NC44 543 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 SAMD11Q96NU1 681 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 SEZ6LQ9BYH1 1024 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 OSBPL7Q9BZF2 842 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 SORCS3Q9UPU3 1222 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 MYH13Q9UKX3 1938 aa8.4□□□□□ -1.06
CTNNA1-216ENST00000519489 AKAP13Q12802 2813 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 SRRM3A6NNA2 597 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 SP9P0CG40 484 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 ATF7P17544 494 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 NCLP19338 710 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 SHMT1P34896 483 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 GGCXP38435 758 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 STAT3P40763 770 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 PURAQ00577 322 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 CNTN2Q02246 1040 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 UBALD2Q8IYN6 164 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 MAGEB6Q8N7X4 407 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 FAM133AQ8N9E0 248 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 WNT8BQ93098 351 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 S1PR5Q9H228 398 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 PCDHB3Q9Y5E6 796 aa8.39□□□□□ -1.07
CTNNA1-216ENST00000519489 RALGAPA2Q2PPJ7 1873 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 TANC1Q9C0D5 1861 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 C2CD4DB7Z1M9 353 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 C5orf67F2Z3F1 127 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 OATP04181 439 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 SDHBP21912 280 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 MTMR3Q13615 1198 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 ABCB5Q2M3G0 1257 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 TAPT1Q6NXT6 567 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 NOL8Q76FK4 1167 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 MAML2Q8IZL2 1156 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 BBC3Q96PG8 261 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 HNRNPABQ99729 332 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 TMUB1Q9BVT8 246 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 PRKD2Q9BZL6 878 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 COL11A1P12107 1806 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 PTPN13Q12923 2485 aa8.38□□□□□ -1.07
CTNNA1-216ENST00000519489 PRR5-ARHGAP8B1AHC4 643 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 EYA2O00167 538 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 VWA5AO00534 786 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ACTN4O43707 911 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 SELPP16109 830 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 NRIP1P48552 1158 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ARHGAP8P85298 464 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ATP2B3Q16720 1220 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 FAM47CQ5HY64 1035 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 PRR23BQ6ZRT6 265 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 LRRC8DQ7L1W4 858 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 RBM23Q86U06 439 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 MYOCDQ8IZQ8 938 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ZGPATQ8N5A5 531 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 TSR2Q969E8 191 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 STK31Q9BXU1 1019 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 MFSD1Q9H3U5 465 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ERVK-5Q9HDB9 667 aa8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 AATFQ9NY61 560 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTNNA1-216ENST00000519489 ZNF462Q96JM2 2506 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms