RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DOCK5Q9H7D0 1870 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 TRIOBPQ9H2D6 2365 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 PSMA5P28066 241 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 METAP2P50579 478 aaKnown RBP eCLIP15.35■□□□□ 0.05
VEGFA-219ENST00000518824 CCT2P78371 535 aaKnown RBP15.35■□□□□ 0.05
VEGFA-219ENST00000518824 SP2Q02086 613 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 ARHGAP1Q07960 439 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 FAAP100Q0VG06 881 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 FBXL16Q8N461 479 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 GLT1D1Q96MS3 346 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 MAP3K20Q9NYL2 800 aaKnown RBP15.35■□□□□ 0.05
VEGFA-219ENST00000518824 DDX41Q9UJV9 622 aaKnown RBP15.35■□□□□ 0.05
VEGFA-219ENST00000518824 FRMPD4Q14CM0 1322 aa15.35■□□□□ 0.05
VEGFA-219ENST00000518824 EIF3JO75822 258 aaKnown RBP15.34■□□□□ 0.05
VEGFA-219ENST00000518824 MYL3P08590 195 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
VEGFA-219ENST00000518824 SEMA3FQ13275 785 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 TTLL4Q14679 1199 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 NTRK3Q16288 839 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 SAMD3Q8N6K7 520 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 AFG1LQ8WV93 481 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 PHKBQ93100 1093 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
VEGFA-219ENST00000518824 RTEL1Q9NZ71 1219 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 TELO2Q9Y4R8 837 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 ELP1O95163 1332 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 NID2Q14112 1375 aa15.34■□□□□ 0.05
VEGFA-219ENST00000518824 B4DLN1 442 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 STXBP3O00186 592 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 ARVCFO00192 962 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 PIK3CDO00329 1044 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 CCND2P30279 289 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 MRPL12P52815 198 aaKnown RBP15.33■□□□□ 0.04
VEGFA-219ENST00000518824 RCAN1P53805 252 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 EVCP57679 992 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 PURAQ00577 322 aaKnown RBP15.33■□□□□ 0.04
VEGFA-219ENST00000518824 TRAF1Q13077 416 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 PKN1Q16512 942 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 ANKRD33Q7Z3H0 272 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 SLC43A3Q8NBI5 491 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 SMARCC2Q8TAQ2 1214 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 PGBD1Q96JS3 809 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 TM6SF1Q9BZW5 370 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 PSTPIP2Q9H939 334 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 CYP46A1Q9Y6A2 500 aa15.33■□□□□ 0.04
VEGFA-219ENST00000518824 A0A0U1RQG5 324 aaPredicted RBP15.32■□□□□ 0.04
VEGFA-219ENST00000518824 NKRFO15226 690 aaKnown RBP eCLIP15.32■□□□□ 0.044e-7■□□□□ 10.1
VEGFA-219ENST00000518824 CLTBP09497 229 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 ITGA7Q13683 1181 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 FAM126BQ8IXS8 530 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 BADQ92934 168 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 TMEM260Q9NX78 707 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 MRVI1Q9Y6F6 885 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 RANBP2P49792 3224 aaKnown RBP15.32■□□□□ 0.04
VEGFA-219ENST00000518824 SCN10AQ9Y5Y9 1956 aa15.32■□□□□ 0.04
VEGFA-219ENST00000518824 A6NJR5 290 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 GH1P01241 217 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 MMP3P08254 477 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 BMP8BP34820 402 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 FXR1P51114 621 aaKnown RBP eCLIP15.31■□□□□ 0.04
VEGFA-219ENST00000518824 NAPAP54920 295 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 STK3Q13188 491 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 CUL5Q93034 780 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 TRPV6Q9H1D0 765 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 TBX21Q9UL17 535 aa15.31■□□□□ 0.04
VEGFA-219ENST00000518824 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-219ENST00000518824 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 ZEB2O60315 1214 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 CD4P01730 458 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
VEGFA-219ENST00000518824 CPT1AP50416 773 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 EPHB4P54760 987 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 PFKFB3Q16875 520 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-219ENST00000518824 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 KAT2BQ92831 832 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 TOX2Q96NM4 488 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 INPP4AQ96PE3 977 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-219ENST00000518824 UBE2OQ9C0C9 1292 aaKnown RBP15.3■□□□□ 0.04
VEGFA-219ENST00000518824 TMEM39AQ9NV64 488 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 BARHL2Q9NY43 387 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 PCDHA6Q9UN73 950 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 PCDHA8Q9Y5H6 950 aa15.3■□□□□ 0.04
VEGFA-219ENST00000518824 SMCO2A6NFE2 343 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 DCDC2CA8MYV0 355 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 PRPF3O43395 683 aaKnown RBP15.29■□□□□ 0.04
VEGFA-219ENST00000518824 B4GALT4O60513 344 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 GGPS1O95749 300 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 SCG2P13521 617 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 NBPF20Q3BBV1 942 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 HSDL1Q3SXM5 330 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 CELF3Q5SZQ8 465 aaKnown RBP15.29■□□□□ 0.04
VEGFA-219ENST00000518824 MYSM1Q5VVJ2 828 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 PCNX4Q63HM2 1172 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 MTG1Q9BT17 334 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-219ENST00000518824 SLC26A6Q9BXS9 759 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 POLR3EQ9NVU0 708 aa15.29■□□□□ 0.04
VEGFA-219ENST00000518824 PRKAG2Q9UGJ0 569 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms