RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 ZC3H7BQ9UGR2 993 aaKnown RBP7.98□□□□□ -1.13
CCDC6-203ENST00000518638 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 LAMB1P07942 1786 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 PSME4Q14997 1843 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 MANSC4A6NHS7 340 aaPredicted RBP7.97□□□□□ -1.13
CCDC6-203ENST00000518638 PAGE1O75459 146 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 NEFMP07197 916 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 CELA3AP09093 270 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 VIL1P09327 827 aaKnown RBP7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ARNTP27540 789 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 MMP14P50281 582 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ST13P50502 369 aaKnown RBP7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ZNF280AP59817 542 aaPredicted RBP7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ZNF792Q3KQV3 632 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 LCE5AQ5TCM9 118 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 MEI1Q5TIA1 1274 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ANGEL2Q5VTE6 544 aaKnown RBP7.97□□□□□ -1.13
CCDC6-203ENST00000518638 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 OTOP1Q7RTM1 612 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ARMC9Q7Z3E5 817 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 ARMC5Q96C12 935 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 SLC38A3Q99624 504 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 EMILIN2Q9BXX0 1053 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 DBNDD1Q9H9R9 158 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 KRT82Q9NSB4 513 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 SLC5A6Q9Y289 635 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 RRP7AQ9Y3A4 280 aaKnown RBP7.97□□□□□ -1.13
CCDC6-203ENST00000518638 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 SH3TC1Q8TE82 1336 aa7.97□□□□□ -1.13
CCDC6-203ENST00000518638 MYL6BP14649 208 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 TAF1CQ15572 869 aaPredicted RBP7.96□□□□□ -1.14
CCDC6-203ENST00000518638 OTUD7BQ6GQQ9 843 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 DLK2Q6UY11 383 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 TTLL7Q6ZT98 887 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 MCM10Q7L590 875 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
CCDC6-203ENST00000518638 ZC3H12CQ9C0D7 883 aaKnown RBP7.96□□□□□ -1.14
CCDC6-203ENST00000518638 SYNGAP1Q96PV0 1343 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 RTL9Q8NET4 1388 aa7.96□□□□□ -1.14
CCDC6-203ENST00000518638 COL1A1P02452 1464 aaPredicted RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 ZBTB48P10074 688 aaPredicted RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 BMP6P22004 513 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 CYP27A1Q02318 531 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF252P-AS1Q0IIN9 211 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 PDE3AQ14432 1141 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 CCDC85BQ15834 202 aaPredicted RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 STK11IPQ8N1F8 1099 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 BCL7CQ8WUZ0 217 aaPredicted RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 FAM168AQ92567 244 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 GATA6Q92908 595 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 PHACTR3Q96KR7 559 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 MYOZ2Q9NPC6 264 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 TRMT112Q9UI30 125 aaKnown RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 PTPN22Q9Y2R2 807 aa7.95□□□□□ -1.14
CCDC6-203ENST00000518638 KIAA0100Q14667 2235 aaKnown RBP7.95□□□□□ -1.14
CCDC6-203ENST00000518638 TAF1P21675 1872 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 UBE2Q2LH0YL09 131 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 HSPA5P11021 654 aaKnown RBP7.94□□□□□ -1.14
CCDC6-203ENST00000518638 DRD2P14416 443 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 HSP90B1P14625 803 aaKnown RBP7.94□□□□□ -1.14
CCDC6-203ENST00000518638 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC6-203ENST00000518638 PCNX4Q63HM2 1172 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 ATG4DQ86TL0 474 aaPredicted RBP7.94□□□□□ -1.14
CCDC6-203ENST00000518638 C2CD4AQ8NCU7 369 aaPredicted RBP7.94□□□□□ -1.14
CCDC6-203ENST00000518638 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 NOC4LQ9BVI4 516 aaKnown RBP7.94□□□□□ -1.14
CCDC6-203ENST00000518638 MYO3BQ8WXR4 1341 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 CLSPNQ9HAW4 1339 aa7.94□□□□□ -1.14
CCDC6-203ENST00000518638 SCN9AQ15858 1988 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 A0A1W2PPC1 479 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 ADH5P11766 374 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
CCDC6-203ENST00000518638 EN2P19622 333 aaPredicted RBP7.93□□□□□ -1.14
CCDC6-203ENST00000518638 EIF4A1P60842 406 aaKnown RBP7.93□□□□□ -1.14
CCDC6-203ENST00000518638 LRRC14Q15048 493 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 SLC9C1Q4G0N8 1177 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 CC2D1BQ5T0F9 858 aaKnown RBP7.93□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF574Q6ZN55 896 aaPredicted RBP7.93□□□□□ -1.14
CCDC6-203ENST00000518638 NLRP10Q86W26 655 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 APOBEC3FQ8IUX4 373 aaKnown RBP7.93□□□□□ -1.14
CCDC6-203ENST00000518638 KCNB2Q92953 911 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF333Q96JL9 665 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 CBX8Q9HC52 389 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 RAD18Q9NS91 495 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 IGSF5Q9NSI5 407 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 CACNA2D2Q9NY47 1150 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 CYP8B1Q9UNU6 501 aa7.93□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF862O60290 1169 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 U2AF1L5P0DN76 240 aaPredicted RBP7.92□□□□□ -1.14
CCDC6-203ENST00000518638 LIG1P18858 919 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 U2AF1Q01081 240 aaKnown RBP eCLIP7.92□□□□□ -1.14
CCDC6-203ENST00000518638 SP3Q02447 781 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 SOX4Q06945 474 aaPredicted RBP7.92□□□□□ -1.14
CCDC6-203ENST00000518638 SF3B3Q15393 1217 aaKnown RBP7.92□□□□□ -1.14
CCDC6-203ENST00000518638 SLC4A8Q2Y0W8 1093 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 RASIP1Q5U651 963 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 SCARA3Q6AZY7 606 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms