RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 POTEMA6NI47 508 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 PSMA7O14818 248 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 HOXA13P31271 388 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-203ENST00000517693 CCT6AP40227 531 aaKnown RBP13.22□□□□□ -0.29
SPIDR-203ENST00000517693 ASIC1P78348 528 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 FANCCQ00597 558 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 RAD54LQ92698 747 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
SPIDR-203ENST00000517693 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
SPIDR-203ENST00000517693 SSC5DA1L4H1 1573 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPIDR-203ENST00000517693 MUTP22033 750 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 GRB10Q13322 594 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 COBLL1Q53SF7 1204 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 NIPA1Q7RTP0 329 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-203ENST00000517693 MTRQ99707 1265 aa13.21□□□□□ -0.29
SPIDR-203ENST00000517693 BICDL2A1A5D9 508 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 CLCN1P35523 988 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 UBASH3AP57075 661 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 NOC3LQ8WTT2 800 aaKnown RBP13.2□□□□□ -0.3
SPIDR-203ENST00000517693 STAMQ92783 540 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 HOXC10Q9NYD6 342 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 ZNF536O15090 1300 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 VWA5AO00534 786 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 BCRP11274 1271 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 ALAS1P13196 640 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 PSMD2Q13200 908 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 COG2Q14746 738 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 FILIP1LQ4L180 1135 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 KLHL10Q6JEL2 608 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 XRRA1Q6P2D8 792 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 UNC13DQ70J99 1090 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 GIMAP8Q8ND71 665 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-203ENST00000517693 LENG9Q96B70 501 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-203ENST00000517693 PLIN2Q99541 437 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 XPO4Q9C0E2 1151 aaKnown RBP13.2□□□□□ -0.3
SPIDR-203ENST00000517693 FANCLQ9NW38 375 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
SPIDR-203ENST00000517693 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPIDR-203ENST00000517693 PPP1R3GB7ZBB8 358 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 ZNF500O60304 480 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-203ENST00000517693 KIF20AO95235 890 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 ZNF18P17022 549 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 RPA1P27694 616 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 DSG3P32926 999 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 HMGCS2P54868 508 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPIDR-203ENST00000517693 PDE4DQ08499 809 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 NEK9Q8TD19 979 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 BLOC1S4Q9NUP1 217 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 CTNND2Q9UQB3 1225 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
SPIDR-203ENST00000517693 GOLGB1Q14789 3259 aaKnown RBP13.19□□□□□ -0.3
SPIDR-203ENST00000517693 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 MSH4O15457 936 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 USP2O75604 605 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-203ENST00000517693 CASP1P29466 404 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 EPHX2P34913 555 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 SCN4AP35499 1836 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 PPP2R5CQ13362 524 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 GPR162Q16538 588 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 NCAPH2Q6IBW4 605 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-203ENST00000517693 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 MB21D1Q8N884 522 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 CLEC4DQ8WXI8 215 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 POLR3CQ9BUI4 534 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-203ENST00000517693 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
SPIDR-203ENST00000517693 TCEAL9Q9UHQ7 104 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 KLRC4O43908 158 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 GAS7O60861 476 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
SPIDR-203ENST00000517693 TPM2P07951 284 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 VGLL4Q14135 290 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms