RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 MSCO60682 206 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SASH1O94885 1247 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 ZBTB7AO95365 584 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 C8BP07358 591 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SLURP1P55000 103 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 CACNB2Q08289 660 aaPredicted RBP3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SMAD4Q13485 552 aaKnown RBP3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SLC35F1Q5T1Q4 408 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 MILR1Q7Z6M3 343 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SAPCD2Q86UD0 394 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 DCP2Q8IU60 420 aaKnown RBP3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 NLGN1Q8N2Q7 840 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 CPA5Q8WXQ8 436 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 TRMT2BQ96GJ1 504 aaKnown RBP3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 TMEM169Q96HH4 297 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SPATA25Q9BR10 227 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 IER2Q9BTL4 223 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 SPATA6Q9NWH7 488 aaPredicted RBP3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 PALD1Q9ULE6 856 aa3.57□□□□□ -1.84
RN7SKP49-201ENST00000516675 BLACEA4D250 179 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 CPP00450 1065 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 LTBRP36941 435 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 KCNC1P48547 511 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 CAP1Q01518 475 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 KCNAB2Q13303 367 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 TESK1Q15569 626 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 NAALADL2Q58DX5 795 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 ACBD5Q5T8D3 534 aaPredicted RBP3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 CD300LDQ6UXZ3 194 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 LIPIQ6XZB0 460 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 SP8Q8IXZ3 490 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 Q8N1Y9 231 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 SEC14L1Q92503 715 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 RELTQ969Z4 430 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 ZBTB8AQ96BR9 441 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 CCDC140Q96MF4 163 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 GORASP1Q9BQQ3 440 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 AP5M1Q9H0R1 490 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 EPN3Q9H201 632 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 LUC7LQ9NQ29 371 aaKnown RBP3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 PPARGC1AQ9UBK2 798 aaKnown RBP3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 NPFFR2Q9Y5X5 522 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 X6R8D5 127 aa3.56□□□□□ -1.84
RN7SKP49-201ENST00000516675 SH3D21A4FU49 640 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 B8ZZF3 427 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 AGRPO00253 132 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 PRRG2O14669 202 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 PRODHO43272 600 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 MYO1BO43795 1136 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 FOXD2O60548 495 aaPredicted RBP3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 CYP2C8P10632 490 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 BUD31P41223 144 aaPredicted RBP3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 STAT5AP42229 794 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 SLC6A11P48066 632 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 ZC3H6P61129 1189 aaKnown RBP3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 LSAMPQ13449 338 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 RAB33AQ14088 237 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 NFIXQ14938 502 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 NTRK3Q16288 839 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 MROH9Q5TGP6 573 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 YOD1Q5VVQ6 348 aaPredicted RBP3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 ETV3LQ6ZN32 361 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 USP53Q70EK8 1073 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 MIB1Q86YT6 1006 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 RIOX2Q8IUF8 465 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 ARRDC4Q8NCT1 418 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 KCTD13Q8WZ19 329 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 JAM3Q9BX67 310 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 CDIP1Q9H305 208 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 ARHGEF4Q9NR80 690 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 CLDND1Q9NY35 253 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 RTEL1Q9NZ71 1219 aa3.55□□□□□ -1.84
RN7SKP49-201ENST00000516675 NCANO14594 1321 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 H7BY64 318 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 PRICKLE3O43900 615 aaPredicted RBP3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 GTF2A2P52657 109 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 MAP4K2Q12851 820 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 HSP90AA2PQ14568 343 aaPredicted RBP3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 NT5DC1Q5TFE4 455 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 STEAP3Q658P3 488 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 KCNT2Q6UVM3 1135 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 SPATC1Q76KD6 591 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 RBM12BQ8IXT5 1001 aaKnown RBP3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 CARFQ8N187 725 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 LINC00482Q8N8I6 264 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 OSBP2Q969R2 916 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 C11orf84Q9BUA3 381 aaPredicted RBP3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 PHF20Q9BVI0 1012 aa3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 COA3Q9Y2R0 106 aaPredicted RBP3.54□□□□□ -1.84
RN7SKP49-201ENST00000516675 TCRBV5S2A0A599 114 aa3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 CCDC85CA6NKD9 419 aa3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 HGSO14964 777 aaPredicted RBP3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 TADA3O75528 432 aa3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 STK10O94804 968 aaKnown RBP3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 PABPC1P11940 636 aaKnown RBP3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 THBS2P35442 1172 aa3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 SARSP49591 514 aaKnown RBP3.53□□□□□ -1.84
RN7SKP49-201ENST00000516675 ITGA1P56199 1179 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms