RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 ZSWIM3Q96MP5 696 aa2.02□□□□□ -2.09
SNORA40.13-201ENST00000516379 FCRL3Q96P31 734 aaPredicted RBP2.02□□□□□ -2.09
SNORA40.13-201ENST00000516379 PACSIN3Q9UKS6 424 aa2.02□□□□□ -2.09
SNORA40.13-201ENST00000516379 POLR3KQ9Y2Y1 108 aaPredicted RBP2.02□□□□□ -2.09
SNORA40.13-201ENST00000516379 POLR2AP24928 1970 aaKnown RBP2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 KLHL18O94889 574 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 USP17L7P0C7H9 530 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 STAT5AP42229 794 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 CLK3P49761 638 aaKnown RBP2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 RAD51AP2Q09MP3 1159 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 ATG9BQ674R7 924 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 TMPRSS6Q8IU80 811 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 FAM126BQ8IXS8 530 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 ANKS1AQ92625 1134 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 PRDM13Q9H4Q3 707 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 RNF7Q9UBF6 113 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 FAM8A1Q9UBU6 413 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 TTF2Q9UNY4 1162 aaKnown RBP2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 PCDHB12Q9Y5F1 795 aa2.01□□□□□ -2.09
SNORA40.13-201ENST00000516379 H0Y8X5 98 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 SGSM2O43147 1006 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 CYP7B1O75881 506 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 NTRK1P04629 796 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 POLR2BP30876 1174 aaKnown RBP2□□□□□ -2.09
SNORA40.13-201ENST00000516379 HIBADHP31937 336 aaKnown RBP2□□□□□ -2.09
SNORA40.13-201ENST00000516379 SLC25A3Q00325 362 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 CCDC85BQ15834 202 aaPredicted RBP2□□□□□ -2.09
SNORA40.13-201ENST00000516379 KLHL22Q53GT1 634 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 PRR16Q569H4 304 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 ARSHQ5FYA8 562 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 Q6ZUG5 572 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 FBF1Q8TES7 1133 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 CLIC6Q96NY7 704 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 NELL2Q99435 816 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 ADGRE3Q9BY15 652 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 R3HDMLQ9H3Y0 253 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 C12orf49Q9H741 205 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 NGRNQ9NPE2 291 aaKnown RBP2□□□□□ -2.09
SNORA40.13-201ENST00000516379 PARPBPQ9NWS1 579 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 CROTQ9UKG9 612 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 WASF3Q9UPY6 502 aa2□□□□□ -2.09
SNORA40.13-201ENST00000516379 H0Y858 1186 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 CLEC3AO75596 197 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 RAG1P15918 1043 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 CSF2RBP32927 897 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 SERPINB4P48594 390 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 KRTAP10-5P60370 271 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 NKX3-2P78367 333 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 AUHQ13825 339 aaKnown RBP1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 MAP3K11Q16584 847 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 STRIP1Q5VSL9 837 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 CWF19L1Q69YN2 538 aaKnown RBP1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 TRMT10BQ6PF06 316 aaKnown RBP1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 OLFML1Q6UWY5 402 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 BNC2Q6ZN30 1099 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 TMC7Q7Z402 723 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 MRGPREQ86SM8 312 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 CCDC84Q86UT8 332 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 VRK3Q8IV63 474 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 SMG7Q92540 1137 aaKnown RBP1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 AJUBAQ96IF1 538 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 TLR9Q9NR96 1032 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 FBXL21Q9UKT6 434 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 TLR6Q9Y2C9 796 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 FRMD4BQ9Y2L6 1034 aa1.99□□□□□ -2.09
SNORA40.13-201ENST00000516379 COL11A2P13942 1736 aaPredicted RBP1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 KRTAP23-1A1A580 65 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 MYADML2A6NDP7 307 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 KIAA0355O15063 1070 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 SHOXO15266 292 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 IFNGR1P15260 489 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 CR2P20023 1033 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 NOP2P46087 812 aaKnown RBP1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 FOXF2Q12947 444 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 PCOLCEQ15113 449 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 GPR155Q7Z3F1 870 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 RD3Q7Z3Z2 195 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 C1QL2Q7Z5L3 287 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 DCP2Q8IU60 420 aaKnown RBP1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 TMEM192Q8IY95 271 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 RGS22Q8NE09 1264 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 SETDB2Q96T68 719 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 DSCC1Q9BVC3 393 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 GULP1Q9UBP9 304 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 TESQ9UGI8 421 aaKnown RBP1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 OAZ3Q9UMX2 235 aa1.98□□□□□ -2.09
SNORA40.13-201ENST00000516379 CNTNAP2Q9UHC6 1331 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 ERVV-2B6SEH9 535 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 BPNT1O95861 308 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 RAC3P60763 192 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 FOXL1Q12952 345 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 HDGFL2Q7Z4V5 671 aaPredicted RBP1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 PLEKHO2Q8TD55 490 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 GATAD2BQ8WXI9 593 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 OR14A2Q96R54 314 aa1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 MKRN2Q9H000 416 aaKnown RBP1.97□□□□□ -2.09
SNORA40.13-201ENST00000516379 NOTCH2Q04721 2471 aa1.96□□□□□ -2.1
SNORA40.13-201ENST00000516379 GRID2IPA4D2P6 1211 aa1.96□□□□□ -2.1
SNORA40.13-201ENST00000516379 TREHO43280 583 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms