RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 FAM47CQ5HY64 1035 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 TMEM240Q5SV17 173 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 ZNF697Q5TEC3 545 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 NFRKBQ6P4R8 1299 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 PSRC1Q6PGN9 363 aaPredicted RBP22.62■■□□□ 1.21
DDR1-280ENST00000515881 VSIG10LQ86VR7 867 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 FCHSD1Q86WN1 690 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 RGS20O76081 388 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 PLEKHA8P1O95397 391 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 ACRP10323 421 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 IL31RAQ8NI17 732 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 EMID1Q96A84 441 aaPredicted RBP22.61■■□□□ 1.21
DDR1-280ENST00000515881 FAM161BQ96MY7 647 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 LRRC2Q9BYS8 371 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 IL23AQ9NPF7 189 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 SEC63Q9UGP8 760 aaKnown RBP22.61■■□□□ 1.21
DDR1-280ENST00000515881 STXBP5LQ9Y2K9 1186 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 SLC12A7Q9Y666 1083 aa22.61■■□□□ 1.21
DDR1-280ENST00000515881 RXRAP19793 462 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 CCND2P30279 289 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 CCL23P55773 120 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 PTPN11Q06124 597 aaPredicted RBP22.6■■□□□ 1.21
DDR1-280ENST00000515881 ZNF365Q70YC5 407 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 SRBD1Q8N5C6 995 aaKnown RBP22.6■■□□□ 1.21
DDR1-280ENST00000515881 PPP1R13LQ8WUF5 828 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 GUCD1Q96NT3 240 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 WNT8AQ9H1J5 351 aa22.6■■□□□ 1.21
DDR1-280ENST00000515881 MYH6P13533 1939 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 CYP2C9P11712 490 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 CASTP20810 708 aaKnown RBP22.59■■□□□ 1.21
DDR1-280ENST00000515881 LAMC2Q13753 1193 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 RASIP1Q5U651 963 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 KCNV1Q6PIU1 500 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 SGMS1Q86VZ5 419 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 NEK1Q96PY6 1258 aa22.59■■□□□ 1.21
DDR1-280ENST00000515881 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.58■■□□□ 1.21
DDR1-280ENST00000515881 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.58■■□□□ 1.21
DDR1-280ENST00000515881 DGKDQ16760 1214 aa22.58■■□□□ 1.21
DDR1-280ENST00000515881 TSGA10IPQ3SY00 556 aa22.58■■□□□ 1.21
DDR1-280ENST00000515881 RAB11FIP4Q86YS3 637 aa22.58■■□□□ 1.21
DDR1-280ENST00000515881 DHX37Q8IY37 1157 aaKnown RBP22.58■■□□□ 1.21
DDR1-280ENST00000515881 CMTR1Q8N1G2 835 aaKnown RBP22.58■■□□□ 1.21
DDR1-280ENST00000515881 PPTC7Q8NI37 304 aa22.58■■□□□ 1.21
DDR1-280ENST00000515881 FRMPD4Q14CM0 1322 aa22.57■■□□□ 1.2
DDR1-280ENST00000515881 CHMP4BP1P59074 171 aa22.57■■□□□ 1.2
DDR1-280ENST00000515881 RASEFQ8IZ41 740 aa22.57■■□□□ 1.2
DDR1-280ENST00000515881 FANCBQ8NB91 859 aa22.57■■□□□ 1.2
DDR1-280ENST00000515881 KAT2BQ92831 832 aa22.57■■□□□ 1.2
DDR1-280ENST00000515881 ZFP91Q96JP5 570 aaPredicted RBP22.57■■□□□ 1.2
DDR1-280ENST00000515881 SEMA6BQ9H3T3 888 aa22.57■■□□□ 1.2
DDR1-280ENST00000515881 FGBP02675 491 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 TGFB3P10600 412 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 EXOSC10Q01780 885 aaKnown RBP22.56■■□□□ 1.2
DDR1-280ENST00000515881 CELF3Q5SZQ8 465 aaKnown RBP22.56■■□□□ 1.2
DDR1-280ENST00000515881 MYSM1Q5VVJ2 828 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 TMTC3Q6ZXV5 915 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 DHX32Q7L7V1 743 aaKnown RBP22.56■■□□□ 1.2
DDR1-280ENST00000515881 MICU3Q86XE3 530 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 SMARCC2Q8TAQ2 1214 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 HERVK_113Q902F9 699 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 CUL5Q93034 780 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 SCLYQ96I15 445 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 TTYH1Q9H313 450 aaPredicted RBP22.56■■□□□ 1.2
DDR1-280ENST00000515881 SCN10AQ9Y5Y9 1956 aa22.56■■□□□ 1.2
DDR1-280ENST00000515881 TMEM265A0A087WTH1 108 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 PIK3CDO00329 1044 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 GGPS1O95749 300 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 UBA1P22314 1058 aaKnown RBP22.55■■□□□ 1.2
DDR1-280ENST00000515881 KRT32Q14532 448 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 ADCK5Q3MIX3 580 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 APOA5Q6Q788 366 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 USP17L6PQ6QN14 398 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 SYNE3Q6ZMZ3 975 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 SESTD1Q86VW0 696 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 TCEANC2Q96MN5 208 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 MTIF3Q9H2K0 278 aaKnown RBP22.55■■□□□ 1.2
DDR1-280ENST00000515881 NOD1Q9Y239 953 aa22.55■■□□□ 1.2
DDR1-280ENST00000515881 MEIS2O14770 477 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 STAM2O75886 525 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 HOXD8P13378 290 aaPredicted RBP22.54■■□□□ 1.2
DDR1-280ENST00000515881 DNAJB2P25686 324 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 MRPS9P82933 396 aaKnown RBP22.54■■□□□ 1.2
DDR1-280ENST00000515881 SP2Q02086 613 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 GNPTABQ3T906 1256 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 RPUSD2Q8IZ73 545 aaKnown RBP22.54■■□□□ 1.2
DDR1-280ENST00000515881 CCDC82Q8N4S0 544 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 GPKOWQ92917 476 aaPredicted RBP eCLIP22.54■■□□□ 1.2
DDR1-280ENST00000515881 SPATA33Q96N06 139 aa22.54■■□□□ 1.2
DDR1-280ENST00000515881 INPP4AQ96PE3 977 aaPredicted RBP22.54■■□□□ 1.2
DDR1-280ENST00000515881 hCG_1642624A0A1W2PR95 340 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 PITPNM1O00562 1244 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 SORBS3O60504 671 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 F2P00734 622 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 ZNF286BP0CG31 522 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 PSEN2P49810 448 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 PTGISQ16647 500 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 HSDL1Q3SXM5 330 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 OTOP2Q7RTS6 562 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 VWCEQ96DN2 955 aa22.53■■□□□ 1.2
DDR1-280ENST00000515881 CDX2Q99626 313 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms