RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SUPT20HL1Q3ZLR7 823 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 USP17L6PQ6QN14 398 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
SNF8-214ENST00000515174 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 SULF1Q8IWU6 871 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 SCYL3Q8IZE3 742 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 HAS1Q92839 578 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
SNF8-214ENST00000515174 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 LRWD1Q9UFC0 647 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 PCDHA12Q9UN75 941 aa11.49□□□□□ -0.57
SNF8-214ENST00000515174 RLFQ13129 1914 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 SPDYE3A6NKU9 549 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 C19orf81C9J6K1 198 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 SLC37A4O43826 429 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 RAD21O60216 631 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 TDP2O95551 362 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 ICAM1P05362 532 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 ZNF18P17022 549 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 TECP42680 631 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 TXKP42681 527 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 AFMP43652 599 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 CUL4BQ13620 913 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 ZNF658Q5TYW1 1059 aaPredicted RBP11.48□□□□□ -0.57
SNF8-214ENST00000515174 SPATA1Q5VX52 437 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 CDCA5Q96FF9 252 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 TTC12Q9H892 705 aaPredicted RBP11.48□□□□□ -0.57
SNF8-214ENST00000515174 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
SNF8-214ENST00000515174 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
SNF8-214ENST00000515174 A0A087WWV3 80 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
SNF8-214ENST00000515174 RPN1P04843 607 aaKnown RBP11.47□□□□□ -0.57
SNF8-214ENST00000515174 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 MSNP26038 577 aaKnown RBP11.47□□□□□ -0.57
SNF8-214ENST00000515174 INPP5BP32019 993 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 BACE1P56817 501 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 PRKG1Q13976 671 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 TMEM119Q4V9L6 283 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 KRT79Q5XKE5 535 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 FOXR2Q6PJQ5 311 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 MCF2L2Q86YR7 1114 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 GRAMD1CQ8IYS0 662 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 CCDC47Q96A33 483 aaKnown RBP11.47□□□□□ -0.57
SNF8-214ENST00000515174 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
SNF8-214ENST00000515174 SLF1Q9BQI6 1058 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 NT5C3AQ9H0P0 336 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
SNF8-214ENST00000515174 KDM3AQ9Y4C1 1321 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 LRRC10BA6NIK2 292 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 KLRC4O43908 158 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 SLC10A3P09131 477 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 PTPRAP18433 802 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 PLCG1P19174 1290 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 MUTP22033 750 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 CDC25AP30304 524 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 HSD17B4P51659 736 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 OAZ1P54368 228 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 GSDMDP57764 484 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 FANCCQ00597 558 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 GRB10Q13322 594 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 ISM2Q6H9L7 571 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 SV2BQ7L1I2 683 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 ZNF280CQ8ND82 737 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 ETNPPLQ8TBG4 499 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 LENG9Q96B70 501 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 PNMA5Q96PV4 448 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 WRNIP1Q96S55 665 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 FEZ1Q99689 392 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 TRIM9Q9C026 710 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 SLC38A10Q9HBR0 1119 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.57
SNF8-214ENST00000515174 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 RWDD2AQ9UIY3 292 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 PPP1R9AQ9ULJ8 1098 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 ADAMTS5Q9UNA0 930 aa11.46□□□□□ -0.57
SNF8-214ENST00000515174 ZNF536O15090 1300 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 PP2D1A8MPX8 630 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 PSMD2Q13200 908 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
SNF8-214ENST00000515174 USH1GQ495M9 461 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
SNF8-214ENST00000515174 GIMAP8Q8ND71 665 aaPredicted RBP11.45□□□□□ -0.58
SNF8-214ENST00000515174 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNF8-214ENST00000515174 MED15Q96RN5 788 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
SNF8-214ENST00000515174 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms