RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 PCDHGA11Q9Y5H2 935 aa10.4□□□□□ -0.74
MATR3-224ENST00000514488 TRIOO75962 3097 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 BAZ2AQ9UIF9 1905 aaKnown RBP10.39□□□□□ -0.75
MATR3-224ENST00000514488 ADAMTS4O75173 837 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 FLOT1O75955 427 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 ZNF865P0CJ78 1059 aaPredicted RBP10.39□□□□□ -0.75
MATR3-224ENST00000514488 FCER1AP12319 257 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 PHKA2P46019 1235 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 PLCD1P51178 756 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 PPIGQ13427 754 aaKnown RBP eCLIP10.39□□□□□ -0.75
MATR3-224ENST00000514488 NCOA4Q13772 614 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 GAS6Q14393 721 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 CLEC10AQ8IUN9 316 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 SPICE1Q8N0Z3 855 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 FRAT1Q92837 279 aaPredicted RBP10.39□□□□□ -0.75
MATR3-224ENST00000514488 TOX2Q96NM4 488 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 MMP19Q99542 508 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 TINF2Q9BSI4 451 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 LRFN3Q9BTN0 628 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 EHD4Q9H223 541 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 HDAC5Q9UQL6 1122 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 HCN4Q9Y3Q4 1203 aa10.39□□□□□ -0.75
MATR3-224ENST00000514488 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 TMEM229AB2RXF0 380 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 IPO8O15397 1037 aaKnown RBP10.38□□□□□ -0.75
MATR3-224ENST00000514488 AKR1A1P14550 325 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 RABGGTBP53611 331 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.75
MATR3-224ENST00000514488 MTX1Q13505 466 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 TMEM132BQ14DG7 1078 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 KCNA10Q16322 511 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 ABRAQ8N0Z2 381 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 MAGEB6Q8N7X4 407 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
MATR3-224ENST00000514488 MSRAQ9UJ68 235 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 ROBO3Q96MS0 1386 aa10.38□□□□□ -0.75
MATR3-224ENST00000514488 FAM86C2PA6NEL3 165 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 IDH1O75874 414 aaKnown RBP10.37□□□□□ -0.75
MATR3-224ENST00000514488 MYOGP15173 224 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 CYP2C18P33260 490 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 SMTNP53814 917 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 SRSF11Q05519 484 aaKnown RBP10.37□□□□□ -0.75
MATR3-224ENST00000514488 SCN5AQ14524 2016 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 RAB30Q15771 203 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 ZNF792Q3KQV3 632 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 TNNI3KQ59H18 835 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 CCDC158Q5M9N0 1113 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 PSRC1Q6PGN9 363 aaPredicted RBP10.37□□□□□ -0.75
MATR3-224ENST00000514488 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 NUP133Q8WUM0 1156 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 GTPBP3Q969Y2 492 aaKnown RBP10.37□□□□□ -0.75
MATR3-224ENST00000514488 SLC28A3Q9HAS3 691 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 NRBP1Q9UHY1 535 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 FPGT-TNNI3KV9GXZ4 949 aa10.37□□□□□ -0.75
MATR3-224ENST00000514488 ADCY6O43306 1168 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 POLR3DP05423 398 aaPredicted RBP10.36□□□□□ -0.75
MATR3-224ENST00000514488 CDK7P50613 346 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 LBRQ14739 615 aaKnown RBP10.36□□□□□ -0.75
MATR3-224ENST00000514488 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
MATR3-224ENST00000514488 CCSAPQ6IQ19 270 aaPredicted RBP10.36□□□□□ -0.75
MATR3-224ENST00000514488 CCDC174Q6PII3 467 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 OTOP2Q7RTS6 562 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 PLEKHM2Q8IWE5 1019 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 TMEM199Q8N511 208 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 MB21D1Q8N884 522 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 KLHDC9Q8NEP7 349 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 ARHGAP45Q92619 1136 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 VTI1AQ96AJ9 217 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 TRERF1Q96PN7 1200 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 UCN2Q96RP3 112 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
MATR3-224ENST00000514488 TLR7Q9NYK1 1049 aaKnown RBP10.36□□□□□ -0.75
MATR3-224ENST00000514488 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
MATR3-224ENST00000514488 UMODL1Q5DID0 1318 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 ZBED9Q6R2W3 1325 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 RFXAPO00287 272 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 BCAR3O75815 825 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 GNAI3P08754 354 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 CYP2D6P10635 497 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 GABPAQ06546 454 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 KCTD2Q14681 263 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 TMEM31Q5JXX7 168 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 KRT40Q6A162 431 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 ALYREFQ86V81 257 aaKnown RBP10.35□□□□□ -0.75
MATR3-224ENST00000514488 SIAH1Q8IUQ4 282 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 HERVK_113Q902F9 699 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 GLT1D1Q96MS3 346 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 ANTXR1Q9H6X2 564 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 CERS4Q9HA82 394 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 GPAMQ9HCL2 828 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 IL23AQ9NPF7 189 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 C11orf16Q9NQ32 467 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 TNNQ9UQP3 1299 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 CNPY2Q9Y2B0 182 aa10.35□□□□□ -0.75
MATR3-224ENST00000514488 COL4A4P53420 1690 aaPredicted RBP10.34□□□□□ -0.75
MATR3-224ENST00000514488 MROH7Q68CQ1 1323 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms