RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 PCDHA4Q9UN74 947 aa16.62■□□□□ 0.25
SNF8-212ENST00000514089 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
SNF8-212ENST00000514089 ZEB2O60315 1214 aa16.61■□□□□ 0.25
SNF8-212ENST00000514089 C6orf222P0C671 652 aaPredicted RBP16.61■□□□□ 0.25
SNF8-212ENST00000514089 SMPD1P17405 629 aa16.61■□□□□ 0.25
SNF8-212ENST00000514089 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNF8-212ENST00000514089 GJC2Q5T442 439 aaPredicted RBP16.61■□□□□ 0.25
SNF8-212ENST00000514089 NECAB2Q7Z6G3 386 aa16.61■□□□□ 0.25
SNF8-212ENST00000514089 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
SNF8-212ENST00000514089 LENG1Q96BZ8 264 aaPredicted RBP16.61■□□□□ 0.25
SNF8-212ENST00000514089 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
SNF8-212ENST00000514089 KCNJ14Q9UNX9 436 aa16.61■□□□□ 0.25
SNF8-212ENST00000514089 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
SNF8-212ENST00000514089 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNF8-212ENST00000514089 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 BLIDQ8IZY5 108 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 IL31RAQ8NI17 732 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 PAWRQ96IZ0 340 aaKnown RBP16.6■□□□□ 0.25
SNF8-212ENST00000514089 ANO3Q9BYT9 981 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 KATNBL1Q9H079 304 aa16.6■□□□□ 0.25
SNF8-212ENST00000514089 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
SNF8-212ENST00000514089 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
SNF8-212ENST00000514089 DNM1LO00429 736 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
SNF8-212ENST00000514089 LY6KQ17RY6 165 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 TLK2Q86UE8 772 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 DHX37Q8IY37 1157 aaKnown RBP16.59■□□□□ 0.25
SNF8-212ENST00000514089 PCSK9Q8NBP7 692 aaKnown RBP16.59■□□□□ 0.25
SNF8-212ENST00000514089 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 SENP6Q9GZR1 1112 aaPredicted RBP16.59■□□□□ 0.25
SNF8-212ENST00000514089 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 MLXIPQ9HAP2 919 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 Q9Y3F1 56 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 MGAMO43451 1857 aa16.59■□□□□ 0.25
SNF8-212ENST00000514089 CCDC194A0A1B0GVG4 234 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 RBM47A0AV96 593 aaKnown RBP16.58■□□□□ 0.24
SNF8-212ENST00000514089 GH1P01241 217 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 TGFB3P10600 412 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 FDPSP14324 419 aaKnown RBP16.58■□□□□ 0.24
SNF8-212ENST00000514089 LRRC41Q15345 812 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 RASGRP4Q8TDF6 673 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 C8orf76Q96K31 380 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 PARP14Q460N5 1801 aa16.58■□□□□ 0.24
SNF8-212ENST00000514089 ZNF236Q9UL36 1845 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 SYNRGQ9UMZ2 1314 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 FIBPO43427 364 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 SORBS3O60504 671 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 CD2BP2O95400 341 aaKnown RBP16.57■□□□□ 0.24
SNF8-212ENST00000514089 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
SNF8-212ENST00000514089 KRT2P35908 639 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 CPT1AP50416 773 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 GJA9P57773 515 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 MRPS9P82933 396 aaKnown RBP16.57■□□□□ 0.24
SNF8-212ENST00000514089 ARHGAP4P98171 946 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 MTMR1Q13613 665 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 LAMC2Q13753 1193 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 KCNA10Q16322 511 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 FSCN1Q16658 493 aaKnown RBP16.57■□□□□ 0.24
SNF8-212ENST00000514089 HSCBQ8IWL3 235 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 DPF3Q92784 378 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 FERMT2Q96AC1 680 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 HTATIP2Q9BUP3 242 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 PHF20Q9BVI0 1012 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
SNF8-212ENST00000514089 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
SNF8-212ENST00000514089 GNEQ9Y223 722 aaKnown RBP16.57■□□□□ 0.24
SNF8-212ENST00000514089 PLXNB2O15031 1838 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 SREBF1P36956 1147 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 CLK2P49760 499 aaKnown RBP16.56■□□□□ 0.24
SNF8-212ENST00000514089 BEX3Q00994 111 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 GUCY1B3Q02153 619 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 MLLT1Q03111 559 aaPredicted RBP16.56■□□□□ 0.24
SNF8-212ENST00000514089 NEDD9Q14511 834 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 GIMAP8Q8ND71 665 aaPredicted RBP16.56■□□□□ 0.24
SNF8-212ENST00000514089 COPS5Q92905 334 aa16.56■□□□□ 0.24
SNF8-212ENST00000514089 FRMPD4Q14CM0 1322 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 SPATA31C2B4DYI2 1134 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 H3BQV1 296 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 NOP56O00567 594 aaKnown RBP16.55■□□□□ 0.24
SNF8-212ENST00000514089 MAFGO15525 162 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 ADCY6O43306 1168 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 MYL3P08590 195 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 ST3GAL1Q11201 340 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 NONOQ15233 471 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNF8-212ENST00000514089 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 KRT40Q6A162 431 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 CCDC62Q6P9F0 684 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 DAGLBQ8NCG7 672 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 DIS3LQ8TF46 1054 aaKnown RBP16.55■□□□□ 0.24
SNF8-212ENST00000514089 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
SNF8-212ENST00000514089 INPP4AQ96PE3 977 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms