RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
SDHA-216ENST00000514027 UIMC1Q96RL1 719 aa13.96□□□□□ -0.17
SDHA-216ENST00000514027 CRAMP1Q96RY5 1269 aa13.96□□□□□ -0.17
SDHA-216ENST00000514027 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.17
SDHA-216ENST00000514027 ZNHIT6Q9NWK9 470 aaKnown RBP13.96□□□□□ -0.17
SDHA-216ENST00000514027 PLIN4Q96Q06 1357 aa13.96□□□□□ -0.17
SDHA-216ENST00000514027 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 MYMKA6NI61 221 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 G3V3G9 751 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 ENC1O14682 589 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.18
SDHA-216ENST00000514027 MARCH6O60337 910 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 ERCC3P19447 782 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
SDHA-216ENST00000514027 NOVP48745 357 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 MAP2K1Q02750 393 aaPredicted RBP13.95□□□□□ -0.18
SDHA-216ENST00000514027 GABPAQ06546 454 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 CCDC122Q5T0U0 273 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 KCTD1Q719H9 257 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 GJA10Q969M2 543 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 RAB34Q9BZG1 259 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
SDHA-216ENST00000514027 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 MYO1AQ9UBC5 1043 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 CTAGE15A4D2H0 777 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 CTAGE8P0CG41 777 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 HERVK_113P62684 666 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 ZNF543Q08ER8 600 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
SDHA-216ENST00000514027 FKBP15Q5T1M5 1219 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 LRCH2Q5VUJ6 765 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 NCAPH2Q6IBW4 605 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 CTAGE6Q86UF2 777 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 CTAGE4Q8IX94 777 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 COA1Q9GZY4 146 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 SEMA6BQ9H3T3 888 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 ANKZF1Q9H8Y5 726 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
SDHA-216ENST00000514027 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
SDHA-216ENST00000514027 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
SDHA-216ENST00000514027 PPP1R2P41236 205 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■□□□ 13.7
SDHA-216ENST00000514027 TUBB2AQ13885 445 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 MIIPQ5JXC2 388 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 KRT79Q5XKE5 535 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 TADA2BQ86TJ2 420 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 RPAINQ86UA6 219 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 GPIHBP1Q8IV16 184 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 SP8Q8IXZ3 490 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 NUDT12Q9BQG2 462 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 TUBB2BQ9BVA1 445 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 STK17AQ9UEE5 414 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 IRF6O14896 467 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 PPP1R12AO14974 1030 aaPredicted RBP13.94□□□□□ -0.18
SDHA-216ENST00000514027 TRIM37O94972 964 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
SDHA-216ENST00000514027 WHAMMP3Q1A5X7 153 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 LONRF2Q1L5Z9 754 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 UNC13DQ70J99 1090 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 JAKMIP2Q96AA8 810 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 PNKPQ96T60 521 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 NUP58Q9BVL2 599 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 TTYH3Q9C0H2 523 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 HAUS4Q9H6D7 363 aa13.94□□□□□ -0.18
SDHA-216ENST00000514027 NHEJ1Q9H9Q4 299 aaPredicted RBP13.94□□□□□ -0.18
SDHA-216ENST00000514027 DDX25Q9UHL0 483 aaKnown RBP13.94□□□□□ -0.18
SDHA-216ENST00000514027 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 CCDC151A5D8V7 595 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 RASSF10A6NK89 507 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 CLSTN1O94985 981 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 HLA-DOAP06340 250 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 SHMT1P34896 483 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 KRT83P78385 493 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 ZBED6P86452 979 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 KCNK18Q7Z418 384 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 RAD54LQ92698 747 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 CUL5Q93034 780 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
SDHA-216ENST00000514027 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 EDIL3O43854 480 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
SDHA-216ENST00000514027 BRD3Q15059 726 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 LRRC41Q15345 812 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 MEA1Q16626 185 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 CDC42EP5Q6NZY7 148 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 DDX12PQ92771 950 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 FAM207AQ9NSI2 230 aaPredicted RBP13.92□□□□□ -0.18
SDHA-216ENST00000514027 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms