RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
DDR1-272ENST00000513243 CABYRO75952 493 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 PDIA3P30101 505 aaKnown RBP20.43■□□□□ 0.86
DDR1-272ENST00000513243 CCND2P30279 289 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 CPT1AP50416 773 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 CDK7P50613 346 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 SH3RF1Q7Z6J0 888 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 TOX2Q96NM4 488 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 PDLIM7Q9NR12 457 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 NID2Q14112 1375 aa20.43■□□□□ 0.86
DDR1-272ENST00000513243 A6NJR5 290 aa20.42■□□□□ 0.86
DDR1-272ENST00000513243 ARVCFO00192 962 aa20.42■□□□□ 0.86
DDR1-272ENST00000513243 MRPS9P82933 396 aaKnown RBP20.42■□□□□ 0.86
DDR1-272ENST00000513243 TYW1BQ6NUM6 668 aa20.42■□□□□ 0.86
DDR1-272ENST00000513243 PRDM5Q9NQX1 630 aaPredicted RBP20.42■□□□□ 0.86
DDR1-272ENST00000513243 PRKAG2Q9UGJ0 569 aa20.42■□□□□ 0.86
DDR1-272ENST00000513243 MRVI1Q9Y6F6 885 aa20.42■□□□□ 0.86
DDR1-272ENST00000513243 GRIN2DO15399 1336 aa20.42■□□□□ 0.86
DDR1-272ENST00000513243 TRIM43BA6NCK2 446 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 SEC24BO95487 1268 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 GH1P01241 217 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 CLTBP09497 229 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 BMP8BP34820 402 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 PURAQ00577 322 aaKnown RBP20.41■□□□□ 0.86
DDR1-272ENST00000513243 MDM2Q00987 491 aaPredicted RBP20.41■□□□□ 0.86
DDR1-272ENST00000513243 ARHGAP1Q07960 439 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 FAAP100Q0VG06 881 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 UBE2SQ16763 222 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 SLC43A3Q8NBI5 491 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 TRIM43Q96BQ3 446 aaPredicted RBP20.41■□□□□ 0.86
DDR1-272ENST00000513243 LARP6Q9BRS8 491 aaKnown RBP20.41■□□□□ 0.86
DDR1-272ENST00000513243 PDRG1Q9NUG6 133 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 POLR3EQ9NVU0 708 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 KIAA1217Q5T5P2 1943 aa20.41■□□□□ 0.86
DDR1-272ENST00000513243 DCDC2CA8MYV0 355 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 STXBP3O00186 592 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 MYL3P08590 195 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 NAPAP54920 295 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 ANAPC15P60006 121 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 PSMC6P62333 389 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 CCT2P78371 535 aaKnown RBP20.4■□□□□ 0.86
DDR1-272ENST00000513243 ITGA7Q13683 1181 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 NTRK3Q16288 839 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 BRDTQ58F21 947 aaPredicted RBP20.4■□□□□ 0.86
DDR1-272ENST00000513243 AFG1LQ8WV93 481 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 NCOA5Q9HCD5 579 aaKnown RBP20.4■□□□□ 0.86
DDR1-272ENST00000513243 BARHL2Q9NY43 387 aa20.4■□□□□ 0.86
DDR1-272ENST00000513243 MROH7Q68CQ1 1323 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 hCG_1984214I3L0E3 225 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 SP2Q02086 613 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 PFKFB3Q16875 520 aaPredicted RBP20.39■□□□□ 0.85
DDR1-272ENST00000513243 PCNX4Q63HM2 1172 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 PPP1R18Q6NYC8 613 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 FAM126BQ8IXS8 530 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 ZNF713Q8N859 430 aaPredicted RBP20.39■□□□□ 0.85
DDR1-272ENST00000513243 LBHD1Q9BQE6 289 aaPredicted RBP20.39■□□□□ 0.85
DDR1-272ENST00000513243 RTEL1Q9NZ71 1219 aa20.39■□□□□ 0.85
DDR1-272ENST00000513243 KIAA0355O15063 1070 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 PRPF3O43395 683 aaKnown RBP20.38■□□□□ 0.85
DDR1-272ENST00000513243 KPNA6O60684 536 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
DDR1-272ENST00000513243 PPFIA3O75145 1194 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 STAM2O75886 525 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 SCG2P13521 617 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 ITGB8P26012 769 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 PKN1Q16512 942 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 PHKBQ93100 1093 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 EMID1Q96A84 441 aaPredicted RBP20.38■□□□□ 0.85
DDR1-272ENST00000513243 IL17RAQ96F46 866 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 ZNF274Q96GC6 653 aaPredicted RBP20.38■□□□□ 0.85
DDR1-272ENST00000513243 INPP4AQ96PE3 977 aaPredicted RBP20.38■□□□□ 0.85
DDR1-272ENST00000513243 MTG1Q9BT17 334 aaPredicted RBP20.38■□□□□ 0.85
DDR1-272ENST00000513243 RIC8AQ9NPQ8 531 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 TMEM39AQ9NV64 488 aa20.38■□□□□ 0.85
DDR1-272ENST00000513243 SMCO2A6NFE2 343 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 MMP3P08254 477 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 TGFB3P10600 412 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 LAMC2Q13753 1193 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 XRRA1Q6P2D8 792 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 DHX37Q8IY37 1157 aaKnown RBP20.37■□□□□ 0.85
DDR1-272ENST00000513243 BADQ92934 168 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 UBE2OQ9C0C9 1292 aaKnown RBP20.37■□□□□ 0.85
DDR1-272ENST00000513243 TBX21Q9UL17 535 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 PCDHA6Q9UN73 950 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 PCDHA8Q9Y5H6 950 aa20.37■□□□□ 0.85
DDR1-272ENST00000513243 A0A1W2PPC1 479 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 SPDYE3A6NKU9 549 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 SPATA31C2B4DYI2 1134 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 SORBS3O60504 671 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 CD4P01730 458 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 IFNAR1P17181 557 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 UBA1P22314 1058 aaKnown RBP20.36■□□□□ 0.85
DDR1-272ENST00000513243 ICAM3P32942 547 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 ADCY7P51828 1080 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 SEMA3FQ13275 785 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 GNPTABQ3T906 1256 aa20.36■□□□□ 0.85
DDR1-272ENST00000513243 CELF3Q5SZQ8 465 aaKnown RBP20.36■□□□□ 0.85
DDR1-272ENST00000513243 MYSM1Q5VVJ2 828 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms