RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 AMNQ9BXJ7 453 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 LMCD1Q9NZU5 365 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 DDX41Q9UJV9 622 aaKnown RBP14.65□□□□□ -0.06
VEGFA-216ENST00000512683 ARIH2O95376 493 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 CXCL10P02778 98 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 NR3C2P08235 984 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 SELPP16109 830 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 CCDC85BQ15834 202 aaPredicted RBP14.64□□□□□ -0.07
VEGFA-216ENST00000512683 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 SEPT14Q6ZU15 432 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 PPTC7Q8NI37 304 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 TBC1D5Q92609 795 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 JMJD4Q9H9V9 463 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 NEDD4P46934 1319 aa14.64□□□□□ -0.07
VEGFA-216ENST00000512683 ABHD14A-ACY1A0A1B0GW23 586 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 CA3P07451 260 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 HOXD8P13378 290 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-216ENST00000512683 MYOGP15173 224 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 KCNJ6P48051 423 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 HSD17B4P51659 736 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 PTK7Q13308 1070 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 LY6KQ17RY6 165 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 STOX1Q6ZVD7 989 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 C7orf31Q8N865 590 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 ADAMTS19Q8TE59 1207 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 KAT2BQ92831 832 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 MTMR8Q96EF0 704 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 UHRF1Q96T88 793 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-216ENST00000512683 GTF2IRD1Q9UHL9 959 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 MTCH2Q9Y6C9 303 aa14.63□□□□□ -0.07
VEGFA-216ENST00000512683 B4E1Z4 1266 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 DHX16O60231 1041 aaKnown RBP14.62□□□□□ -0.07
VEGFA-216ENST00000512683 BMP1P13497 986 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 IFIT1BQ5T764 474 aaKnown RBP14.62□□□□□ -0.07
VEGFA-216ENST00000512683 CNKSR3Q6P9H4 555 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 LRRC8DQ7L1W4 858 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 VSIG10LQ86VR7 867 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 DHX37Q8IY37 1157 aaKnown RBP14.62□□□□□ -0.07
VEGFA-216ENST00000512683 IL25Q9H293 177 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 VAT1LQ9HCJ6 419 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 COL20A1Q9P218 1284 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 MRVI1Q9Y6F6 885 aa14.62□□□□□ -0.07
VEGFA-216ENST00000512683 PALM3A6NDB9 673 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-216ENST00000512683 KLRF2D3W0D1 207 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 HAS3O00219 553 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 ZBTB5O15062 677 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 F2P00734 622 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 CFBP00751 764 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
VEGFA-216ENST00000512683 PSEN2P49810 448 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 TAP1Q03518 808 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 TRDNQ13061 729 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 GDF6Q6KF10 455 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-216ENST00000512683 CTAGE1Q96RT6 745 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 RAD9AQ99638 391 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 PDCD2LQ9BRP1 358 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 PRUNE2Q8WUY3 3088 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 LRRC37A2A6NM11 1700 aa14.61□□□□□ -0.07
VEGFA-216ENST00000512683 MYH6P13533 1939 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 NCOR1O75376 2440 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 TLL1O43897 1013 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 STAM2O75886 525 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 CKBP12277 381 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 EIF2AK2P19525 551 aaKnown RBP14.6□□□□□ -0.07
VEGFA-216ENST00000512683 IKBKEQ14164 716 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 SEC23AQ15436 765 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 TTC22Q5TAA0 569 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 RUFY2Q8WXA3 655 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 C1QTNF1Q9BXJ1 281 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 CPVLQ9H3G5 476 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 HDAC6Q9UBN7 1215 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 PCDHA1Q9Y5I3 950 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-216ENST00000512683 EMSYQ7Z589 1322 aa14.6□□□□□ -0.07
VEGFA-216ENST00000512683 GCOM1H8Y6P7 765 aaPredicted RBP14.59□□□□□ -0.07
VEGFA-216ENST00000512683 POLR2MP0CAP2 368 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 WDR5P61964 334 aaKnown RBP14.59□□□□□ -0.07
VEGFA-216ENST00000512683 MFSD10Q14728 455 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 GPNMBQ14956 572 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 KIAA0753Q2KHM9 967 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 CELF3Q5SZQ8 465 aaKnown RBP14.59□□□□□ -0.07
VEGFA-216ENST00000512683 CHST3Q7LGC8 479 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 ZBED2Q9BTP6 218 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 RIOX1Q9H6W3 641 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 EYSQ5T1H1 3165 aa14.59□□□□□ -0.07
VEGFA-216ENST00000512683 ERICH2A1L162 156 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 OPLAHO14841 1288 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 CAND2O75155 1236 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 GJB5O95377 273 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 SKIV2LQ15477 1246 aaKnown RBP14.58□□□□□ -0.08
VEGFA-216ENST00000512683 ARNTL2Q8WYA1 636 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 DHX38Q92620 1227 aaKnown RBP14.58□□□□□ -0.08
VEGFA-216ENST00000512683 HLA-CQ95604 372 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
VEGFA-216ENST00000512683 CHD9Q3L8U1 2897 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms