RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TRAF1Q13077 416 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 SART3Q15020 963 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 DGKDQ16760 1214 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 DEFB128Q7Z7B8 93 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 SESTD1Q86VW0 696 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 PPP1R13LQ8WUF5 828 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 EMID1Q96A84 441 aaPredicted RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 DDX41Q9UJV9 622 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 PCDHA1Q9Y5I3 950 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 SPTBN5Q9NRC6 3674 aaKnown RBP17.08■□□□□ 0.33
CCHCR1-229ENST00000512418 CHD7Q9P2D1 2997 aa17.08■□□□□ 0.33
CCHCR1-229ENST00000512418 SCN5AQ14524 2016 aa17.08■□□□□ 0.33
CCHCR1-229ENST00000512418 SGSM2O43147 1006 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 IQCF3P0C7M6 154 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 ATP2A2P16615 1042 aaKnown RBP17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 CHMP4BP1P59074 171 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 GRM4Q14833 912 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 HOMER1Q86YM7 354 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 USP38Q8NB14 1042 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 PCDHA11Q9Y5I1 949 aa17.08■□□□□ 0.32
CCHCR1-229ENST00000512418 E7EWF7 191 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 RABGGTBP53611 331 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 LAMC2Q13753 1193 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 WTAPQ15007 396 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 PTGISQ16647 500 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 CCDC155Q8N6L0 562 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 PPTC7Q8NI37 304 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 KAT2BQ92831 832 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 KATNAL1Q9BW62 490 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 RIOX1Q9H6W3 641 aa17.07■□□□□ 0.32
CCHCR1-229ENST00000512418 MYO9BQ13459 2157 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 TROAPQ12815 778 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 PPP2R2DQ66LE6 453 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 AFAP1L1Q8TED9 768 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
CCHCR1-229ENST00000512418 GCOM1H8Y6P7 765 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 CYTH3O43739 400 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 F2P00734 622 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 POLR2MP0CAP2 368 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 HOXA13P31271 388 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 ADGRE1Q14246 886 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 PGM5Q15124 567 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 SLC35G1Q2M3R5 365 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 GDF6Q6KF10 455 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 CATIPQ7Z7H3 387 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 DHX37Q8IY37 1157 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 CTAGE1Q96RT6 745 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 PIGSQ96S52 555 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 SENP2Q9HC62 589 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 GTF2IRD1Q9UHL9 959 aa17.05■□□□□ 0.32
CCHCR1-229ENST00000512418 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 RGS20O76081 388 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 MYOGP15173 224 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 IGFBP4P22692 258 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 PSEN2P49810 448 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 RBL2Q08999 1139 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 PHOSPHO2Q8TCD6 241 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 FTOQ9C0B1 505 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCHCR1-229ENST00000512418 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 HAS3O00219 553 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 BAIAP3O94812 1187 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 PARNO95453 639 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 ZNF286BP0CG31 522 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 TGFB3P10600 412 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 SELPP16109 830 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 CCND2P30279 289 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 MFSD10Q14728 455 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 TJAP1Q5JTD0 557 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 MYSM1Q5VVJ2 828 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 IL31RAQ8NI17 732 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 PPM1EQ8WY54 764 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 HDAC6Q9UBN7 1215 aa17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 RBM8AQ9Y5S9 174 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 BAZ2BQ9UIF8 2168 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-229ENST00000512418 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 PPFIA4O75335 1185 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 GGPS1O95749 300 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 CA3P07451 260 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 UBA1P22314 1058 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms