RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PCDHA8Q9Y5H6 950 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 SYNRGQ9UMZ2 1314 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 ESYT2A0FGR8 921 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 MOXD2PA6NHM9 499 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 ZEB2O60315 1214 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 DEXIO95424 95 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 TGFB3P10600 412 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 GNA11P29992 359 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 ANP32AP39687 249 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 ACLYP53396 1101 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 RABEP1Q15276 862 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 KCNA10Q16322 511 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 MCTP2Q6DN12 878 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 CCDC62Q6P9F0 684 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 KCNV1Q6PIU1 500 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 NECAB1Q8N987 351 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 PCSK9Q8NBP7 692 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 CCDC148Q8NFR7 591 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 ZMYND12Q9H0C1 365 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 SH3GLB2Q9NR46 395 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 PHF24Q9UPV7 400 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 FRMPD4Q14CM0 1322 aa8.2□□□□□ -1.1
PDLIM5-215ENST00000511586 LCTP09848 1927 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 MYADML2A6NDP7 307 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 CTAGE5O15320 804 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 ST18O60284 1047 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 EVI5O60447 810 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 RGS20O76081 388 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 ARIH2O95376 493 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 LARGE1O95461 756 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 CTDNEP1O95476 244 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 ASGR1P07306 291 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 XBP1P17861 261 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 NLRP5P59047 1200 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 IRX5P78411 483 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 MRPS9P82933 396 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 FSCN1Q16658 493 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 LY6KQ17RY6 165 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 GNPTABQ3T906 1256 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 BRDTQ58F21 947 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 TMEM63BQ5T3F8 832 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 CCSAPQ6IQ19 270 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 OR6J1Q8NGC5 347 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 IL31RAQ8NI17 732 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 BICD2Q8TD16 824 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 WASF1Q92558 559 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 GTF3C6Q969F1 213 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 FERMT2Q96AC1 680 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 ZFP91Q96JP5 570 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 ZSCAN31Q96LW9 406 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 INPP4AQ96PE3 977 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 RTEL1Q9NZ71 1219 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 VPS54Q9P1Q0 977 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 DDX41Q9UJV9 622 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 STK36Q9NRP7 1315 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 MCM3APO60318 1980 aa8.19□□□□□ -1.1
PDLIM5-215ENST00000511586 A0A1W2PQ45 241 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 A0A1W2PQY0 241 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 SPATA31C2B4DYI2 1134 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 FIBPO43427 364 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 KPNA6O60684 536 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 CABYRO75952 493 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 GH1P01241 217 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 PTGS1P23219 599 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 ICAM3P32942 547 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 CPT1AP50416 773 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 ATN1P54259 1190 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 BEX3Q00994 111 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 LAMC2Q13753 1193 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 GALNT17Q6IS24 598 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 SLC39A5Q6ZMH5 540 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 NLRX1Q86UT6 975 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 DHX37Q8IY37 1157 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 REXO1Q8N1G1 1221 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 COPS5Q92905 334 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 CDHR1Q96JP9 859 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 GLT1D1Q96MS3 346 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 STARD7Q9NQZ5 370 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 SH2B1Q9NRF2 756 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 TMEM260Q9NX78 707 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 ORC3Q9UBD5 711 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 NR2E3Q9Y5X4 410 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 ELP1O95163 1332 aa8.18□□□□□ -1.1
PDLIM5-215ENST00000511586 MKI67P46013 3256 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-215ENST00000511586 A6NJR5 290 aa8.17□□□□□ -1.1
PDLIM5-215ENST00000511586 MAFGO15525 162 aa8.17□□□□□ -1.1
PDLIM5-215ENST00000511586 ITGB5P18084 799 aa8.17□□□□□ -1.1
PDLIM5-215ENST00000511586 SREBF1P36956 1147 aa8.17□□□□□ -1.1
PDLIM5-215ENST00000511586 MCM2P49736 904 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms