RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 ZFP91Q96JP5 570 aaPredicted RBP21.44■■□□□ 1.02
LSM6-206ENST00000510331 POLR3EQ9NVU0 708 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 FRMPD4Q14CM0 1322 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 A6NJR5 290 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 EIF3JO75822 258 aaKnown RBP21.43■■□□□ 1.02
LSM6-206ENST00000510331 REC8O95072 547 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 CD4P01730 458 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 EPHB4P54760 987 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 PPP1R12CQ9BZL4 782 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 MRVI1Q9Y6F6 885 aa21.43■■□□□ 1.02
LSM6-206ENST00000510331 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 TLR3O15455 904 aaKnown RBP21.42■■□□□ 1.02
LSM6-206ENST00000510331 ZBTB43O43298 467 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 GH1P01241 217 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
LSM6-206ENST00000510331 MMP3P08254 477 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 SHHQ15465 462 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 RTN1Q16799 776 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 USP17L6PQ6QN14 398 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 SYNE3Q6ZMZ3 975 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 AFG1LQ8WV93 481 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 GPKOWQ92917 476 aaPredicted RBP eCLIP21.42■■□□□ 1.02
LSM6-206ENST00000510331 MTG1Q9BT17 334 aaPredicted RBP21.42■■□□□ 1.02
LSM6-206ENST00000510331 TANC1Q9C0D5 1861 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 TRPV6Q9H1D0 765 aa21.42■■□□□ 1.02
LSM6-206ENST00000510331 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 B4GALT4O60513 344 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 TIMP1P01033 207 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 HMGB1P09429 215 aaKnown RBP21.41■■□□□ 1.02
LSM6-206ENST00000510331 CCND2P30279 289 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 FPGSQ05932 587 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 BRDTQ58F21 947 aaPredicted RBP21.41■■□□□ 1.02
LSM6-206ENST00000510331 VSIG10LQ86VR7 867 aa21.41■■□□□ 1.02
LSM6-206ENST00000510331 DDX41Q9UJV9 622 aaKnown RBP21.41■■□□□ 1.02
LSM6-206ENST00000510331 UMODL1Q5DID0 1318 aa21.4■■□□□ 1.02
LSM6-206ENST00000510331 MEIS2O14770 477 aa21.4■■□□□ 1.02
LSM6-206ENST00000510331 SORBS3O60504 671 aa21.4■■□□□ 1.02
LSM6-206ENST00000510331 ERICH6BQ5W0A0 696 aa21.4■■□□□ 1.02
LSM6-206ENST00000510331 HEATR3Q7Z4Q2 680 aa21.4■■□□□ 1.02
LSM6-206ENST00000510331 SMARCC2Q8TAQ2 1214 aa21.4■■□□□ 1.02
LSM6-206ENST00000510331 ALDH8A1Q9H2A2 487 aaPredicted RBP21.4■■□□□ 1.02
LSM6-206ENST00000510331 TRMT13Q9NUP7 481 aaKnown RBP21.4■■□□□ 1.02
LSM6-206ENST00000510331 RBM28Q9NW13 759 aaKnown RBP21.4■■□□□ 1.02
LSM6-206ENST00000510331 NAP1L2Q9ULW6 460 aaPredicted RBP21.4■■□□□ 1.02
LSM6-206ENST00000510331 UBA1P22314 1058 aaKnown RBP21.39■■□□□ 1.01
LSM6-206ENST00000510331 FGD1P98174 961 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 APOBRQ0VD83 1088 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 FUT2Q10981 343 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 WWC2Q6AWC2 1192 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 BLOC1S2Q6QNY1 142 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 Q6ZUG5 572 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 BRF1Q92994 677 aa21.39■■□□□ 1.01
LSM6-206ENST00000510331 PIK3CDO00329 1044 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 CASTP20810 708 aaKnown RBP21.38■■□□□ 1.01
LSM6-206ENST00000510331 CDC27P30260 824 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 CYP2C18P33260 490 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 MRPS9P82933 396 aaKnown RBP21.38■■□□□ 1.01
LSM6-206ENST00000510331 UBE2SQ16763 222 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 NBPF20Q3BBV1 942 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 FAM47CQ5HY64 1035 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 CUL5Q93034 780 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 EMID1Q96A84 441 aaPredicted RBP21.38■■□□□ 1.01
LSM6-206ENST00000510331 HIPK3Q9H422 1215 aa21.38■■□□□ 1.01
LSM6-206ENST00000510331 FAM217BQ9NTX9 383 aaPredicted RBP21.38■■□□□ 1.01
LSM6-206ENST00000510331 ZNF286BP0CG31 522 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 RPS6KB1P23443 525 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 CHMP4BP1P59074 171 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 MFSD5Q6N075 450 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 TYW1BQ6NUM6 668 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 NOC4LQ9BVI4 516 aaKnown RBP21.37■■□□□ 1.01
LSM6-206ENST00000510331 SEZ6LQ9BYH1 1024 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 PSTPIP2Q9H939 334 aa21.37■■□□□ 1.01
LSM6-206ENST00000510331 NID2Q14112 1375 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 SCN5AQ14524 2016 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 KPNA6O60684 536 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 GGPS1O95749 300 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 CSF2RAP15509 400 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 METAP2P50579 478 aaKnown RBP eCLIP21.36■■□□□ 1.01
LSM6-206ENST00000510331 RCAN1P53805 252 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 SP2Q02086 613 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 Q7L0L9 218 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
LSM6-206ENST00000510331 PPTC7Q8NI37 304 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 KAT2BQ92831 832 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 RNPC3Q96LT9 517 aaKnown RBP21.36■■□□□ 1.01
LSM6-206ENST00000510331 INPP4AQ96PE3 977 aaPredicted RBP21.36■■□□□ 1.01
LSM6-206ENST00000510331 WNT8AQ9H1J5 351 aa21.36■■□□□ 1.01
LSM6-206ENST00000510331 CYP2C9P11712 490 aa21.35■■□□□ 1.01
LSM6-206ENST00000510331 SEMA3FQ13275 785 aa21.35■■□□□ 1.01
LSM6-206ENST00000510331 CELF3Q5SZQ8 465 aaKnown RBP21.35■■□□□ 1.01
LSM6-206ENST00000510331 NFRKBQ6P4R8 1299 aa21.35■■□□□ 1.01
LSM6-206ENST00000510331 CDH23Q9H251 3354 aa21.34■■□□□ 1.01
LSM6-206ENST00000510331 PPIGQ13427 754 aaKnown RBP eCLIP21.34■■□□□ 1.01
LSM6-206ENST00000510331 LAMC2Q13753 1193 aa21.34■■□□□ 1.01
LSM6-206ENST00000510331 DGKDQ16760 1214 aa21.34■■□□□ 1.01
LSM6-206ENST00000510331 GNPTABQ3T906 1256 aa21.34■■□□□ 1.01
LSM6-206ENST00000510331 MYSM1Q5VVJ2 828 aa21.34■■□□□ 1.01
LSM6-206ENST00000510331 PCNX4Q63HM2 1172 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms