RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 CATIPQ7Z7H3 387 aa23.31■■□□□ 1.32
TRIO-215ENST00000510281 HOMER1Q86YM7 354 aa23.31■■□□□ 1.32
TRIO-215ENST00000510281 ZNF654Q8IZM8 581 aa23.31■■□□□ 1.32
TRIO-215ENST00000510281 UHRF1Q96T88 793 aaPredicted RBP23.31■■□□□ 1.32
TRIO-215ENST00000510281 ADD3Q9UEY8 706 aaKnown RBP23.31■■□□□ 1.32
TRIO-215ENST00000510281 PCDHA11Q9Y5I1 949 aa23.31■■□□□ 1.32
TRIO-215ENST00000510281 SLC4A7Q9Y6M7 1214 aa23.31■■□□□ 1.32
TRIO-215ENST00000510281 PSMC6P62333 389 aa23.3■■□□□ 1.32
TRIO-215ENST00000510281 RAB11FIP4Q86YS3 637 aa23.3■■□□□ 1.32
TRIO-215ENST00000510281 RASEFQ8IZ41 740 aa23.3■■□□□ 1.32
TRIO-215ENST00000510281 PIGSQ96S52 555 aa23.3■■□□□ 1.32
TRIO-215ENST00000510281 ALDH8A1Q9H2A2 487 aaPredicted RBP23.3■■□□□ 1.32
TRIO-215ENST00000510281 COL20A1Q9P218 1284 aa23.3■■□□□ 1.32
TRIO-215ENST00000510281 OPLAHO14841 1288 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 ZBTB5O15062 677 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 PFKMP08237 780 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 RXRAP19793 462 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 RABGGTBP53611 331 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 DUSP28Q4G0W2 176 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 PPP2R2DQ66LE6 453 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 SYTL5Q8TDW5 730 aaPredicted RBP23.29■■□□□ 1.32
TRIO-215ENST00000510281 TCEANC2Q96MN5 208 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 AMNQ9BXJ7 453 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 RIOX1Q9H6W3 641 aa23.29■■□□□ 1.32
TRIO-215ENST00000510281 REV3LO60673 3130 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 LOC102724159A0A0B4J2E5 919 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 DDAH1O94760 285 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 PWP2Q15269 919 aaKnown RBP23.28■■□□□ 1.32
TRIO-215ENST00000510281 ADCK5Q3MIX3 580 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 RNF20Q5VTR2 975 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 NFXL1Q6ZNB6 911 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 RGS22Q8NE09 1264 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 PIBF1Q8WXW3 757 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 TMEM87BQ96K49 555 aa23.28■■□□□ 1.32
TRIO-215ENST00000510281 MRPL11Q9Y3B7 192 aaKnown RBP23.28■■□□□ 1.32
TRIO-215ENST00000510281 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 MYOGP15173 224 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 EDNRBP24530 442 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 SCLYQ96I15 445 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 TAAR1Q96RJ0 339 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 MTA3Q9BTC8 594 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 TSPYL2Q9H2G4 693 aaPredicted RBP23.27■■□□□ 1.32
TRIO-215ENST00000510281 POLR3EQ9NVU0 708 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 TRANK1O15050 2925 aa23.27■■□□□ 1.32
TRIO-215ENST00000510281 RBM47A0AV96 593 aaKnown RBP23.26■■□□□ 1.31
TRIO-215ENST00000510281 CCDC69A6NI79 296 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 PLEKHA8P1O95397 391 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 ATP2A2P16615 1042 aaKnown RBP23.26■■□□□ 1.31
TRIO-215ENST00000510281 POU3F3P20264 500 aaPredicted RBP23.26■■□□□ 1.31
TRIO-215ENST00000510281 PDE4DQ08499 809 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 IL27Q8NEV9 243 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 DNERQ8NFT8 737 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 IPO9Q96P70 1041 aaKnown RBP23.26■■□□□ 1.31
TRIO-215ENST00000510281 NEK1Q96PY6 1258 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 TRMT13Q9NUP7 481 aaKnown RBP23.26■■□□□ 1.31
TRIO-215ENST00000510281 GBF1Q92538 1859 aa23.26■■□□□ 1.31
TRIO-215ENST00000510281 PURAQ00577 322 aaKnown RBP23.25■■□□□ 1.31
TRIO-215ENST00000510281 TTLL4Q14679 1199 aa23.25■■□□□ 1.31
TRIO-215ENST00000510281 MCF2L2Q86YR7 1114 aa23.25■■□□□ 1.31
TRIO-215ENST00000510281 CTCFLQ8NI51 663 aaPredicted RBP23.25■■□□□ 1.31
TRIO-215ENST00000510281 PCDHA1Q9Y5I3 950 aa23.25■■□□□ 1.31
TRIO-215ENST00000510281 MYH6P13533 1939 aa23.25■■□□□ 1.31
TRIO-215ENST00000510281 ZBBXA8MT70 800 aa23.24■■□□□ 1.31
TRIO-215ENST00000510281 CFBP00751 764 aa23.24■■□□□ 1.31
TRIO-215ENST00000510281 BMP1P13497 986 aa23.24■■□□□ 1.31
TRIO-215ENST00000510281 LIFRP42702 1097 aa23.24■■□□□ 1.31
TRIO-215ENST00000510281 CPT1AP50416 773 aa23.24■■□□□ 1.31
TRIO-215ENST00000510281 WDR11Q9BZH6 1224 aa23.24■■□□□ 1.31
TRIO-215ENST00000510281 CYP2C9P11712 490 aa23.23■■□□□ 1.31
TRIO-215ENST00000510281 CMTR1Q8N1G2 835 aaKnown RBP23.23■■□□□ 1.31
TRIO-215ENST00000510281 MAP3K14Q99558 947 aa23.23■■□□□ 1.31
TRIO-215ENST00000510281 MTG1Q9BT17 334 aaPredicted RBP23.23■■□□□ 1.31
TRIO-215ENST00000510281 EIF2AK2P19525 551 aaKnown RBP23.22■■□□□ 1.31
TRIO-215ENST00000510281 HOXA13P31271 388 aaPredicted RBP23.22■■□□□ 1.31
TRIO-215ENST00000510281 KIF5BP33176 963 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 RFC2P35250 354 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 HSD17B4P51659 736 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 EXOSC10Q01780 885 aaKnown RBP23.22■■□□□ 1.31
TRIO-215ENST00000510281 TSGA10IPQ3SY00 556 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 MICU3Q86XE3 530 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 RMDN3Q96TC7 470 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 RAPGEFL1Q9UHV5 662 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 SLC12A7Q9Y666 1083 aa23.22■■□□□ 1.31
TRIO-215ENST00000510281 BAZ2BQ9UIF8 2168 aaKnown RBP23.21■■□□□ 1.31
TRIO-215ENST00000510281 PNMA6FA0A0J9YX94 578 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 ARIH2O95376 493 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 CPA1P15085 419 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 GHRHRQ02643 423 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 AAK1Q2M2I8 961 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 DHX32Q7L7V1 743 aaKnown RBP23.21■■□□□ 1.31
TRIO-215ENST00000510281 SGMS1Q86VZ5 419 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 SRBD1Q8N5C6 995 aaKnown RBP23.21■■□□□ 1.31
TRIO-215ENST00000510281 PHOSPHO2Q8TCD6 241 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 NSUN6Q8TEA1 469 aaKnown RBP23.21■■□□□ 1.31
TRIO-215ENST00000510281 COPS5Q92905 334 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 SLC9A7Q96T83 725 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 MPHOSPH6Q99547 160 aaKnown RBP23.21■■□□□ 1.31
TRIO-215ENST00000510281 SPZ1Q9BXG8 430 aa23.21■■□□□ 1.31
TRIO-215ENST00000510281 MTCH2Q9Y6C9 303 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms