RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PTGS1P23219 599 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 GNAQP50148 359 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 CPT1AP50416 773 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 METAP2P50579 478 aaKnown RBP eCLIP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 TTLL4Q14679 1199 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 STXBP2Q15833 593 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 DUSP28Q4G0W2 176 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 CCSAPQ6IQ19 270 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 SEPT14Q6ZU15 432 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 SH3RF1Q7Z6J0 888 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 MORC4Q8TE76 937 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 GPKOWQ92917 476 aaPredicted RBP eCLIP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 BADQ92934 168 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 RRP36Q96EU6 259 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 ZNF274Q96GC6 653 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 MAF1Q9H063 256 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 GJB4Q9NTQ9 266 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 SEC63Q9UGP8 760 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 NAP1L2Q9ULW6 460 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 Q9Y3F1 56 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 DOCK5Q9H7D0 1870 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 TRIM43BA6NCK2 446 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 GCOM1H8Y6P7 765 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 NKRFO15226 690 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 JAK2O60674 1132 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 POLR2MP0CAP2 368 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 MYCLP12524 364 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 FDPSP14324 419 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 HOXA13P31271 388 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 RCAN1P53805 252 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 CHMP4BP1P59074 171 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 NPY5RQ15761 445 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 TMEM63BQ5T3F8 832 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 ANKRD33Q7Z3H0 272 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 FCHSD1Q86WN1 690 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 GTF3C6Q969F1 213 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 TRIM43Q96BQ3 446 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 TOX2Q96NM4 488 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 IWS1Q96ST2 819 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
PDLIM5-213ENST00000509357 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 KIAA1217Q5T5P2 1943 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 RBM47A0AV96 593 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 STXBP3O00186 592 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 CTAGE5O15320 804 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 EDIL3O43854 480 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 NR3C2P08235 984 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 EDNRBP24530 442 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 SMARCA1P28370 1054 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 PSMC6P62333 389 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 GHRHRQ02643 423 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 FAAP100Q0VG06 881 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 ITGA7Q13683 1181 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 NSUN7Q8NE18 718 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 COPS5Q92905 334 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 CUL5Q93034 780 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 PXMP2Q9NR77 195 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 MAP3K20Q9NYL2 800 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 V9GY48 417 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-213ENST00000509357 ALPK3Q96L96 1907 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 SOX1O00570 391 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 MEIS2O14770 477 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 KIAA0355O15063 1070 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 KPNA6O60684 536 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 IFNAR1P17181 557 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 HSD17B4P51659 736 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 NKX3-2P78367 333 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 FPGSQ05932 587 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 RABEP1Q15276 862 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 LY6KQ17RY6 165 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 SAMD3Q8N6K7 520 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 IL31RAQ8NI17 732 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 SMARCC2Q8TAQ2 1214 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 MTG1Q9BT17 334 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 SEZ6LQ9BYH1 1024 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 RBM28Q9NW13 759 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
PDLIM5-213ENST00000509357 LAMA3Q16787 3333 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 PRPF3O43395 683 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 TIMP1P01033 207 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 GH1P01241 217 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 CCND2P30279 289 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 CDK7P50613 346 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 SHHQ15465 462 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 PFKFB3Q16875 520 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 LRIT3Q3SXY7 679 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 CCDC83Q8IWF9 413 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 TMEM199Q8N511 208 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
PDLIM5-213ENST00000509357 SORBS3O60504 671 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 ARIH2O95376 493 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 ITGB8P26012 769 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 PGM5Q15124 567 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 UBE2SQ16763 222 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms