RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 EEF2P13639 858 aaKnown RBP12.2□□□□□ -0.46
SEC31A-228ENST00000509142 CEP112Q8N8E3 955 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 TSG101Q99816 390 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 TANGO6Q9C0B7 1094 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 CAPN11Q9UMQ6 739 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 PVALEFA0A1B0GWK0 134 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 BRD3Q15059 726 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 RAD54LQ92698 747 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 GJA10Q969M2 543 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 AGPAT5Q9NUQ2 364 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 SRGAP2O75044 1071 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
SEC31A-228ENST00000509142 DDX12PQ92771 950 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 ZHX3Q9H4I2 956 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 PPP1R11O60927 126 aaPredicted RBP12.19□□□□□ -0.46
SEC31A-228ENST00000509142 GCFC2P16383 781 aaKnown RBP12.19□□□□□ -0.46
SEC31A-228ENST00000509142 ERCC3P19447 782 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 KRT83P78385 493 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 QRICH1Q2TAL8 776 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 PPP4R3AQ6IN85 833 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 KIAA0895Q8NCT3 520 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 TRERF1Q96PN7 1200 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
SEC31A-228ENST00000509142 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 TTYH3Q9C0H2 523 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 DUSP10Q9Y6W6 482 aa12.19□□□□□ -0.46
SEC31A-228ENST00000509142 LRRIQ3A6PVS8 624 aaPredicted RBP12.18□□□□□ -0.46
SEC31A-228ENST00000509142 ICA1Q05084 483 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 LRRC41Q15345 812 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 CCDC122Q5T0U0 273 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 DNAJC7Q99615 494 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 LACRTQ9GZZ8 138 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 MMRN2Q9H8L6 949 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 ATP1A1P05023 1023 aaKnown RBP12.18□□□□□ -0.46
SEC31A-228ENST00000509142 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
SEC31A-228ENST00000509142 TUBB2AQ13885 445 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 SEPT2Q15019 361 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 TUBB2BQ9BVA1 445 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 TULP2O00295 520 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 GDF11O95390 407 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 CDC37Q16543 378 aaPredicted RBP12.18□□□□□ -0.46
SEC31A-228ENST00000509142 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 EHD4Q9H223 541 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 SEMA6BQ9H3T3 888 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 MYO1AQ9UBC5 1043 aa12.18□□□□□ -0.46
SEC31A-228ENST00000509142 DDTLA6NHG4 134 aaPredicted RBP12.17□□□□□ -0.46
SEC31A-228ENST00000509142 ECE2O60344 883 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 ZBED6P86452 979 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 HAUS4Q9H6D7 363 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CCDC66A2RUB6 948 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 TAF3Q5VWG9 929 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.17□□□□□ -0.46
SEC31A-228ENST00000509142 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
SEC31A-228ENST00000509142 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 DEF6Q9H4E7 631 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 TBC1D7Q9P0N9 293 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 KIAA1024Q9UPX6 916 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 EP400Q96L91 3159 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CTAGE15A4D2H0 777 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 KRT86O43790 486 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CTAGE8P0CG41 777 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 SNAP25P60880 206 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 SPA17Q15506 151 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 USH1GQ495M9 461 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CENPPQ6IPU0 288 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CTAGE6Q86UF2 777 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CTAGE4Q8IX94 777 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
SEC31A-228ENST00000509142 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
SEC31A-228ENST00000509142 ABCB5Q2M3G0 1257 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 KCNK18Q7Z418 384 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 PANK4Q9NVE7 773 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
SEC31A-228ENST00000509142 NYAP2Q9P242 653 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms