RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 MTMR3Q13615 1198 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 TRIM29Q14134 588 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 SPA17Q15506 151 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 GALNTL6Q49A17 601 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 RNF220Q5VTB9 566 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 KLHL29Q96CT2 875 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 PSMB7Q99436 277 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 KRT23Q9C075 422 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 MLXIPQ9HAP2 919 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 SRPRBQ9Y5M8 271 aaKnown RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 GMEB1Q9Y692 573 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 DESP17661 470 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 RFC5P40937 340 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 MAGEA10P43363 369 aaPredicted RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 CYP27A1Q02318 531 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 MAEAQ7L5Y9 396 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 RAB11FIP4Q86YS3 637 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 GBP7Q8N8V2 638 aaPredicted RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 PAGE5Q96GU1 130 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 NDNQ99608 321 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 NSRP1Q9H0G5 558 aaKnown RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 ISCUQ9H1K1 167 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 PICK1Q9NRD5 415 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 CHPF2Q9P2E5 772 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 DBNLQ9UJU6 430 aaKnown RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 GRID2IPA4D2P6 1211 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 MYBP10242 640 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 AFMP43652 599 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 COPS2P61201 443 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 PAK1Q13153 545 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 EPHA10Q5JZY3 1008 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 IRGCQ6NXR0 463 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 TLCD1Q96CP7 247 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 SUCLG2Q96I99 432 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 YIPF2Q9BWQ6 316 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 THAP9Q9H5L6 903 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 GALNT8Q9NY28 637 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 DLGAP2Q9P1A6 1054 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 CPDO75976 1380 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 ZNF263O14978 683 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 HOXB7P09629 217 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 INHBCP55103 352 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 CUL1Q13616 776 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 RASA3Q14644 834 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 TSNAXIP1Q2TAA8 658 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 NOSTRINQ8IVI9 506 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 MB21D2Q8IYB1 491 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 MS4A14Q96JA4 679 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 TLR10Q9BXR5 811 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 TTYH3Q9C0H2 523 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 PREBQ9HCU5 417 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 STK38LQ9Y2H1 464 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 MYH6P13533 1939 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 KDM3BQ7LBC6 1761 aa10.99□□□□□ -0.65
PDGFRA-207ENST00000509092 PDS5AQ29RF7 1337 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 WDR19Q8NEZ3 1342 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 DCDC2CA8MYV0 355 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 NCK2O43639 380 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 COBLO75128 1261 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 MMEP08473 750 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PEX5P50542 639 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 TOB1P50616 345 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 BNIP1Q12981 228 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 ASRGL1Q7L266 308 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 LRRC34Q8IZ02 419 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 RETREG2Q8NC44 543 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 ATXN2LQ8WWM7 1075 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 KAZALD1Q96I82 304 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PBKQ96KB5 322 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 KRT12Q99456 494 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 IFIH1Q9BYX4 1025 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 FAM192AQ9GZU8 254 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 VCX3BQ9H321 246 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 CCDC134Q9H6E4 229 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 RNPEPL1Q9HAU8 725 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 VCX3AQ9NNX9 186 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 DBF4Q9UBU7 674 aaPredicted RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PCDHA13Q9Y5I0 950 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 UTYO14607 1347 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PARP1P09874 1014 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 CALB2P22676 271 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 ECHS1P30084 290 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 HLTFQ14527 1009 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 PLS1Q14651 629 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 TRADDQ15628 312 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 ZRSR2Q15696 482 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 Q4G0T1 1027 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 FOXB2Q5VYV0 432 aa10.98□□□□□ -0.65
PDGFRA-207ENST00000509092 RRAGBQ5VZM2 374 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms