RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 MTG1Q9BT17 334 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 SPZ1Q9BXG8 430 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 SEC63Q9UGP8 760 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 A6NJR5 290 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 GH1P01241 217 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 ACRP10323 421 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 GHRHRQ02643 423 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 PGM5Q15124 567 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 NBPF20Q3BBV1 942 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 MFSD5Q6N075 450 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 MAP3K14Q99558 947 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 MTA3Q9BTC8 594 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 ALDH8A1Q9H2A2 487 aaPredicted RBP17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 HIPK3Q9H422 1215 aa17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 TRMT13Q9NUP7 481 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-228ENST00000508974 EIF3JO75822 258 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 MMP3P08254 477 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 CALM1P0DP23 149 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 CALM2P0DP24 149 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 CALM3P0DP25 149 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 LIFRP42702 1097 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 CCL23P55773 120 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 DDX41Q9UJV9 622 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-228ENST00000508974 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 RGS20O76081 388 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 CYP2C9P11712 490 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 CPA1P15085 419 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 CCND2P30279 289 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 GNAQP50148 359 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 USP17L6PQ6QN14 398 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 NAP1L2Q9ULW6 460 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-228ENST00000508974 PPIGQ13427 754 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■□□□□ 10.5
UBE2D3-228ENST00000508974 GPR153Q6NV75 609 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 DHX37Q8IY37 1157 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 FANCBQ8NB91 859 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 SCLYQ96I15 445 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 LZTS2Q9BRK4 669 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 NOC4LQ9BVI4 516 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 BRPF3Q9ULD4 1205 aa17.09■□□□□ 0.33
UBE2D3-228ENST00000508974 GBF1Q92538 1859 aa17.08■□□□□ 0.33
UBE2D3-228ENST00000508974 TANC1Q9C0D5 1861 aa17.08■□□□□ 0.33
UBE2D3-228ENST00000508974 KPNA6O60684 536 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 ZNF286BP0CG31 522 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 FGD1P98174 961 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 APOA5Q6Q788 366 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 SGMS1Q86VZ5 419 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 CUL5Q93034 780 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 MTMR10Q9NXD2 777 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 RTEL1Q9NZ71 1219 aa17.08■□□□□ 0.32
UBE2D3-228ENST00000508974 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 ZBTB43O43298 467 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 GGPS1O95749 300 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 KRT32Q14532 448 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 UBE2SQ16763 222 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 FAM109BQ6ICB4 259 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 ZNF365Q70YC5 407 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 JAKMIP1Q96N16 626 aaKnown RBP17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 ALG1Q9BT22 464 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 COL6A3P12111 3177 aa17.07■□□□□ 0.32
UBE2D3-228ENST00000508974 TRIP12Q14669 1992 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 CNTNAP5Q8WYK1 1306 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 SUPT20HL2P0C7V6 817 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 UBA1P22314 1058 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 SP2Q02086 613 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 LAMC2Q13753 1193 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 DGKDQ16760 1214 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 RTN1Q16799 776 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 NFRKBQ6P4R8 1299 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 KAT2BQ92831 832 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms