RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 RIOX2Q8IUF8 465 aa10.59□□□□□ -0.71
CHD1-205ENST00000508756 IFNL3Q8IZI9 196 aa10.59□□□□□ -0.71
CHD1-205ENST00000508756 PTPRN2Q92932 1015 aa10.59□□□□□ -0.71
CHD1-205ENST00000508756 PEX11GQ96HA9 241 aa10.59□□□□□ -0.71
CHD1-205ENST00000508756 NUDT5Q9UKK9 219 aa10.59□□□□□ -0.71
CHD1-205ENST00000508756 COA3Q9Y2R0 106 aaPredicted RBP10.59□□□□□ -0.71
CHD1-205ENST00000508756 C8AP07357 584 aa10.58□□□□□ -0.72
CHD1-205ENST00000508756 CDR1P51861 262 aa10.58□□□□□ -0.72
CHD1-205ENST00000508756 MAMDC2Q7Z304 686 aaPredicted RBP10.58□□□□□ -0.72
CHD1-205ENST00000508756 DCP2Q8IU60 420 aaKnown RBP10.58□□□□□ -0.72
CHD1-205ENST00000508756 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHD1-205ENST00000508756 RNPC3Q96LT9 517 aaKnown RBP10.58□□□□□ -0.72
CHD1-205ENST00000508756 PPP1R16BQ96T49 567 aa10.58□□□□□ -0.72
CHD1-205ENST00000508756 JAM3Q9BX67 310 aa10.58□□□□□ -0.72
CHD1-205ENST00000508756 KRTAP9-6A0A140TA67 174 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 NCKAP1LP55160 1127 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 GABREP78334 506 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 KIZQ2M2Z5 673 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 SLC52A2Q9HAB3 445 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 NDOR1Q9UHB4 597 aa10.57□□□□□ -0.72
CHD1-205ENST00000508756 SGSM2O43147 1006 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 IGSF3O75054 1194 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 C1QTNF9P0C862 333 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 GLDCP23378 1020 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 GRK2P25098 689 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 GRK3P35626 688 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 ATG14Q6ZNE5 492 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 LDHDQ86WU2 507 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 TSPAN17Q96FV3 270 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 AP5M1Q9H0R1 490 aa10.56□□□□□ -0.72
CHD1-205ENST00000508756 ESYT3A0FGR9 886 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 NFIBO00712 420 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 AQP7O14520 342 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 TSPAN15O95858 294 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 SLC6A11P48066 632 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
CHD1-205ENST00000508756 JAZF1Q86VZ6 243 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 ALG3Q92685 438 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 EPB41L1Q9H4G0 881 aa10.55□□□□□ -0.72
CHD1-205ENST00000508756 SOD2P04179 222 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 FBLN1P23142 703 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 PKN1Q16512 942 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 MZB1Q8WU39 189 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 KCNJ15Q99712 375 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 IPPKQ9H8X2 491 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
CHD1-205ENST00000508756 PALD1Q9ULE6 856 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 PCDHA9Q9Y5H5 950 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 PCDHA8Q9Y5H6 950 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 PCDHA5Q9Y5H7 936 aa10.54□□□□□ -0.72
CHD1-205ENST00000508756 MRPL42Q9Y6G3 142 aaKnown RBP10.54□□□□□ -0.72
CHD1-205ENST00000508756 CCDC163A0A0D9SF12 145 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 N4BP3O15049 544 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 DGKIO75912 1065 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 GUCY1A3Q02108 690 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 IGDCC3Q8IVU1 814 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 BHLHE22Q8NFJ8 381 aaPredicted RBP10.53□□□□□ -0.72
CHD1-205ENST00000508756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHD1-205ENST00000508756 ALG1Q9BT22 464 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 TMEM260Q9NX78 707 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 SFMBT1Q9UHJ3 866 aa10.53□□□□□ -0.72
CHD1-205ENST00000508756 TCAF2A6NFQ2 919 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 ZBTB7AO95365 584 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 CRTAMO95727 393 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 PMLP29590 882 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 RAP1GAPP47736 663 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 SLC9A5Q14940 896 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 STEAP3Q658P3 488 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 GSTCDQ8NEC7 633 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 MRPL4Q9BYD3 311 aaKnown RBP10.52□□□□□ -0.73
CHD1-205ENST00000508756 CD320Q9NPF0 282 aa10.52□□□□□ -0.73
CHD1-205ENST00000508756 SMG5Q9UPR3 1016 aaKnown RBP10.52□□□□□ -0.73
CHD1-205ENST00000508756 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.51□□□□□ -0.73
CHD1-205ENST00000508756 PPP1R12AO14974 1030 aaPredicted RBP10.51□□□□□ -0.73
CHD1-205ENST00000508756 RAPGEF3O95398 923 aa10.51□□□□□ -0.73
CHD1-205ENST00000508756 ASGR2P07307 311 aa10.51□□□□□ -0.73
CHD1-205ENST00000508756 TRIM61Q5EBN2 209 aa10.51□□□□□ -0.73
CHD1-205ENST00000508756 MILR1Q7Z6M3 343 aa10.51□□□□□ -0.73
CHD1-205ENST00000508756 PIP4K2CQ8TBX8 421 aa10.51□□□□□ -0.73
CHD1-205ENST00000508756 IRS2Q9Y4H2 1338 aa10.51□□□□□ -0.73
CHD1-205ENST00000508756 RASGRP1O95267 797 aa10.5□□□□□ -0.73
CHD1-205ENST00000508756 COL6A2P12110 1019 aa10.5□□□□□ -0.73
CHD1-205ENST00000508756 MC3RP41968 323 aa10.5□□□□□ -0.73
CHD1-205ENST00000508756 PAK1Q13153 545 aa10.5□□□□□ -0.73
CHD1-205ENST00000508756 SSPNQ14714 243 aa10.5□□□□□ -0.73
CHD1-205ENST00000508756 BRAPQ7Z569 592 aa10.5□□□□□ -0.73
CHD1-205ENST00000508756 FAM47E-STBD1D6RA91 191 aa10.49□□□□□ -0.73
CHD1-205ENST00000508756 HGSO14964 777 aaPredicted RBP10.49□□□□□ -0.73
CHD1-205ENST00000508756 EFCAB14O75071 495 aa10.49□□□□□ -0.73
CHD1-205ENST00000508756 EMC4Q5J8M3 183 aa10.49□□□□□ -0.73
CHD1-205ENST00000508756 NOP9Q86U38 636 aaKnown RBP10.49□□□□□ -0.73
CHD1-205ENST00000508756 PCDH19Q8TAB3 1148 aa10.49□□□□□ -0.73
CHD1-205ENST00000508756 SCLYQ96I15 445 aa10.49□□□□□ -0.73
CHD1-205ENST00000508756 ZNF652Q9Y2D9 606 aa10.49□□□□□ -0.73
CHD1-205ENST00000508756 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
CHD1-205ENST00000508756 ARVCFO00192 962 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms