RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLC10A5Q5PT55 438 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ZBTB8OSQ8IWT0 167 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ENGASEQ8NFI3 743 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ARNTL2Q8WYA1 636 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 LPAR1Q92633 364 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ZNF577Q9BSK1 485 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RNF39Q9H2S5 420 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RNF146Q9NTX7 359 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 MAP3K20Q9NYL2 800 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 DDX20Q9UHI6 824 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 FRMD4BQ9Y2L6 1034 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RIC1Q4ADV7 1423 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 TPD52L2O43399 206 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 TXNP10599 105 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 NEK4P51957 841 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 BACE1P56817 501 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 IFRD2Q12894 506 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 IKBKEQ14164 716 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PRAMEF19Q5SWL8 479 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CTR9Q6PD62 1173 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 C3orf67Q6ZVT6 689 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 GANCQ8TET4 914 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RNF34Q969K3 372 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ADPGKQ9BRR6 497 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PLA2G12BQ9BX93 195 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 WDR11Q9BZH6 1224 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 SLITRK6Q9H5Y7 841 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RASSF10A6NK89 507 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 GAS7O60861 476 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RGS20O76081 388 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PRDX5P30044 214 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CCND3P30281 292 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 UBA7P41226 1012 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ADCYAP1R1P41586 468 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 FLT3LGP49771 235 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RTP1P59025 263 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 TEX35Q5T0J7 233 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 FKBP15Q5T1M5 1219 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 COL13A1Q5TAT6 717 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 IFNL3Q8IZI9 196 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 SLC28A3Q9HAS3 691 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ARGLU1Q9NWB6 273 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ARIH1Q9Y4X5 557 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 DLEC1Q9Y238 1755 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 GAS8O95995 478 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PGK2P07205 417 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC175P0C221 793 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 AKR1A1P14550 325 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RXRAP19793 462 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 NONOQ15233 471 aaKnown RBP eCLIP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 IER5Q5VY09 327 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CEP85Q6P2H3 762 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 MSL3Q8N5Y2 521 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 MSANTD4Q8NCY6 345 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CHST13Q8NET6 341 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ARHGAP45Q92619 1136 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 MAF1Q9H063 256 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 DBR1Q9UK59 544 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 UTYO14607 1347 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 FLT1P17948 1338 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 TAF1P21675 1872 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CLTBP09497 229 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 ANXA13P27216 316 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 CAP2P40123 477 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 MYOCDQ8IZQ8 938 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 LCORLQ8N3X6 602 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 DEPTORQ8TB45 409 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 SEPT8Q92599 483 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 NEK1Q96PY6 1258 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 EMILIN2Q9BXX0 1053 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 DUOX1Q9NRD9 1551 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 ATP8B3O60423 1300 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 XRCC6P12956 609 aaKnown RBP eCLIP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 ATF7P17544 494 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 MCM7P33993 719 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 KPNA1P52294 538 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 HERVK_113P62684 666 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 HDLBPQ00341 1268 aaKnown RBP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 FMR1Q06787 632 aaKnown RBP eCLIP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 RASGRF1Q13972 1273 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 ZNF569Q5MCW4 686 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 FBXO22Q8NEZ5 403 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 CDHR1Q96JP9 859 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 COL11A2P13942 1736 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 IL1R1P14778 569 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 GUCY1B3Q02153 619 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 DACT2Q5SW24 774 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 TREML2Q5T2D2 321 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 FAM83AQ86UY5 434 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 SUGP1Q8IWZ8 645 aaKnown RBP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 DEFB123Q8N688 67 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 GIPC2Q8TF65 315 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 TACO1Q9BSH4 297 aaKnown RBP3.28□□□□□ -1.88
NEDD4-208ENST00000508342 C22orf23Q9BZE7 217 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 LRRC27Q9C0I9 530 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 CENPHQ9H3R5 247 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 CFAP45Q9UL16 551 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 RABGAP1Q9Y3P9 1069 aa3.28□□□□□ -1.88
NEDD4-208ENST00000508342 KLF18A0A0U1RQI7 1052 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms