RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 LRRC41Q15345 812 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 GNPTABQ3T906 1256 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 SEPT14Q6ZU15 432 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 TLK2Q86UE8 772 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 AP5M1Q9H0R1 490 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
RNF4-210ENST00000508235 VPS54Q9P1Q0 977 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 ORC3Q9UBD5 711 aaPredicted RBP17.18■□□□□ 0.34
RNF4-210ENST00000508235 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
RNF4-210ENST00000508235 SYNRGQ9UMZ2 1314 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 CENPFP49454 3210 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 CTDNEP1O95476 244 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 PGK1P00558 417 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 C6orf222P0C671 652 aaPredicted RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 TXNP10599 105 aaKnown RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 CLK2P49760 499 aaKnown RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 GJA9P57773 515 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 NKX3-2P78367 333 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 UBE2Q1Q7Z7E8 422 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 REXO1Q8N1G1 1221 aaKnown RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 TSEN34Q9BSV6 310 aaKnown RBP17.17■□□□□ 0.34
RNF4-210ENST00000508235 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 C11orf49Q9H6J7 331 aa17.17■□□□□ 0.34
RNF4-210ENST00000508235 ZEB2O60315 1214 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 ADAMTS4O75173 837 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 TGFB3P10600 412 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 BRDTQ58F21 947 aaPredicted RBP17.16■□□□□ 0.34
RNF4-210ENST00000508235 GJC2Q5T442 439 aaPredicted RBP17.16■□□□□ 0.34
RNF4-210ENST00000508235 NLRX1Q86UT6 975 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 NSUN7Q8NE18 718 aaKnown RBP17.16■□□□□ 0.34
RNF4-210ENST00000508235 IL31RAQ8NI17 732 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 LENG1Q96BZ8 264 aaPredicted RBP17.16■□□□□ 0.34
RNF4-210ENST00000508235 PAWRQ96IZ0 340 aaKnown RBP17.16■□□□□ 0.34
RNF4-210ENST00000508235 ANO3Q9BYT9 981 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 MRVI1Q9Y6F6 885 aa17.16■□□□□ 0.34
RNF4-210ENST00000508235 MOXD2PA6NHM9 499 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 DYNC1LI2O43237 492 aaPredicted RBP17.15■□□□□ 0.34
RNF4-210ENST00000508235 ADCY6O43306 1168 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 MNX1P50219 401 aaPredicted RBP17.15■□□□□ 0.34
RNF4-210ENST00000508235 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
RNF4-210ENST00000508235 GNASQ5JWF2 1037 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 KLHDC9Q8NEP7 349 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 DIS3LQ8TF46 1054 aaKnown RBP17.15■□□□□ 0.34
RNF4-210ENST00000508235 ALG1Q9BT22 464 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 PCDHA4Q9UN74 947 aa17.15■□□□□ 0.34
RNF4-210ENST00000508235 FIBPO43427 364 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 SREBF1P36956 1147 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 CPT1AP50416 773 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
RNF4-210ENST00000508235 TRIM29Q14134 588 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 DAGLBQ8NCG7 672 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 OR6J1Q8NGC5 347 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 CDHR1Q96JP9 859 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 INPP4AQ96PE3 977 aaPredicted RBP17.14■□□□□ 0.33
RNF4-210ENST00000508235 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 PHF24Q9UPV7 400 aa17.14■□□□□ 0.33
RNF4-210ENST00000508235 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 MAFGO15525 162 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 RGS20O76081 388 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 GH1P01241 217 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 COL6A1P12109 1028 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 ICAM3P32942 547 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 ST3GAL1Q11201 340 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 FSCN1Q16658 493 aaKnown RBP17.13■□□□□ 0.33
RNF4-210ENST00000508235 BLIDQ8IZY5 108 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 GPRASP2Q96D09 838 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 PHF20Q9BVI0 1012 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 RTEL1Q9NZ71 1219 aa17.13■□□□□ 0.33
RNF4-210ENST00000508235 DDX41Q9UJV9 622 aaKnown RBP17.13■□□□□ 0.33
RNF4-210ENST00000508235 JAK2O60674 1132 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 CABYRO75952 493 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 ARIH2O95376 493 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
RNF4-210ENST00000508235 ACLYP53396 1101 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 ARHGAP4P98171 946 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 KCNA10Q16322 511 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 LY6KQ17RY6 165 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 GIMAP8Q8ND71 665 aaPredicted RBP17.12■□□□□ 0.33
RNF4-210ENST00000508235 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 SENP6Q9GZR1 1112 aaPredicted RBP17.12■□□□□ 0.33
RNF4-210ENST00000508235 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
RNF4-210ENST00000508235 SPATA31C2B4DYI2 1134 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 KPNA6O60684 536 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 ASGR1P07306 291 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 ZNF76P36508 570 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 MTMR1Q13613 665 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 NEDD9Q14511 834 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
RNF4-210ENST00000508235 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms