RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 ICAM3P32942 547 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 MRPS9P82933 396 aaKnown RBP11.13□□□□□ -0.63
SFXN1-205ENST00000506963 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 FBXO16Q8IX29 292 aaPredicted RBP11.13□□□□□ -0.63
SFXN1-205ENST00000506963 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 U2AF1L4Q8WU68 220 aaKnown RBP11.13□□□□□ -0.63
SFXN1-205ENST00000506963 SCFD2Q8WU76 684 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 ZHX1Q9UKY1 873 aaPredicted RBP11.13□□□□□ -0.63
SFXN1-205ENST00000506963 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
SFXN1-205ENST00000506963 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
SFXN1-205ENST00000506963 DDX49Q9Y6V7 483 aaKnown RBP11.13□□□□□ -0.63
SFXN1-205ENST00000506963 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
SFXN1-205ENST00000506963 MAFGO15525 162 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 MMP1P03956 469 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 TGFB3P10600 412 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 CIITAP33076 1130 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-205ENST00000506963 DUSP28Q4G0W2 176 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 KRT40Q6A162 431 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 TNFRSF25Q93038 417 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 DEFB118Q96PH6 123 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
SFXN1-205ENST00000506963 PDGFCQ9NRA1 345 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 UBIAD1Q9Y5Z9 338 aa11.12□□□□□ -0.63
SFXN1-205ENST00000506963 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 ADCY6O43306 1168 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 DTNBO60941 627 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 RARBP10826 455 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 SMPD1P17405 629 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 ITGB5P18084 799 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-205ENST00000506963 CNGA1P29973 690 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 ADCYAP1R1P41586 468 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 USP11P51784 963 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 ARHGAP4P98171 946 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 TNFAIP2Q03169 654 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 TRIM29Q14134 588 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 TTLL4Q14679 1199 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 GNPTABQ3T906 1256 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 MOXD1Q6UVY6 613 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 KRT25Q7Z3Z0 450 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 FAM184AQ8NB25 1140 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 EMID1Q96A84 441 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-205ENST00000506963 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 C8orf76Q96K31 380 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 WDR11Q9BZH6 1224 aa11.11□□□□□ -0.63
SFXN1-205ENST00000506963 DDX41Q9UJV9 622 aaKnown RBP11.11□□□□□ -0.63
SFXN1-205ENST00000506963 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-205ENST00000506963 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 MEIS1O00470 390 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 FIBPO43427 364 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 EDIL3O43854 480 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 MYCLP12524 364 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-205ENST00000506963 GJB2P29033 226 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 KRT2P35908 639 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-205ENST00000506963 GJA9P57773 515 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 UBE2Q1Q7Z7E8 422 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 HSCBQ8IWL3 235 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 KLHDC9Q8NEP7 349 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 RASGRP4Q8TDF6 673 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 CDHR1Q96JP9 859 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 BRMS1Q9HCU9 246 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 JADE2Q9NQC1 790 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 SMC3Q9UQE7 1217 aa11.1□□□□□ -0.63
SFXN1-205ENST00000506963 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 IGLV3-22A0A075B6J6 115 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 CYP3A7-CYP3A51PA0A087WV96 503 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 CCDC85CA6NKD9 419 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 CTAGE5O15320 804 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 ARIH2O95376 493 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
SFXN1-205ENST00000506963 TXNP10599 105 aaKnown RBP11.09□□□□□ -0.63
SFXN1-205ENST00000506963 CYP3A7P24462 503 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 U2AF2P26368 475 aaKnown RBP eCLIP11.09□□□□□ -0.636e-7■■■□□ 15.9
SFXN1-205ENST00000506963 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 NONOQ15233 471 aaKnown RBP eCLIP11.09□□□□□ -0.63
SFXN1-205ENST00000506963 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
SFXN1-205ENST00000506963 CCSAPQ6IQ19 270 aaPredicted RBP11.09□□□□□ -0.63
SFXN1-205ENST00000506963 SEPT14Q6ZU15 432 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 DIS3L2Q8IYB7 885 aaKnown RBP11.09□□□□□ -0.63
SFXN1-205ENST00000506963 ARRDC4Q8NCT1 418 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
SFXN1-205ENST00000506963 MBOAT7Q96N66 472 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms