RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 PLXNA1Q9UIW2 1896 aa16.15■□□□□ 0.18
SNHG4-203ENST00000506188 SPDYE3A6NKU9 549 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 PURAQ00577 322 aaKnown RBP16.14■□□□□ 0.17
SNHG4-203ENST00000506188 AKAP17AQ02040 695 aaKnown RBP16.14■□□□□ 0.17
SNHG4-203ENST00000506188 PTPN11Q06124 597 aaPredicted RBP16.14■□□□□ 0.17
SNHG4-203ENST00000506188 LY6KQ17RY6 165 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 CCDC62Q6P9F0 684 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 HEATR3Q7Z4Q2 680 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 KATNAL1Q9BW62 490 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
SNHG4-203ENST00000506188 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
SNHG4-203ENST00000506188 TBX21Q9UL17 535 aa16.14■□□□□ 0.17
SNHG4-203ENST00000506188 hCG_1984214I3L0E3 225 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 OPLAHO14841 1288 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 PSMC6P62333 389 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 TMEM63BQ5T3F8 832 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 NFRKBQ6P4R8 1299 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 RAB11FIP4Q86YS3 637 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 CMTR1Q8N1G2 835 aaKnown RBP16.13■□□□□ 0.17
SNHG4-203ENST00000506188 ZNF713Q8N859 430 aaPredicted RBP16.13■□□□□ 0.17
SNHG4-203ENST00000506188 AFG1LQ8WV93 481 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 COPS5Q92905 334 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 CDHR1Q96JP9 859 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 HIPK3Q9H422 1215 aa16.13■□□□□ 0.17
SNHG4-203ENST00000506188 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 METAP2P50579 478 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNHG4-203ENST00000506188 NEDD9Q14511 834 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 SLC35G1Q2M3R5 365 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 RPUSD2Q8IZ73 545 aaKnown RBP16.12■□□□□ 0.17
SNHG4-203ENST00000506188 CCDC155Q8N6L0 562 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 GIMAP8Q8ND71 665 aaPredicted RBP16.12■□□□□ 0.17
SNHG4-203ENST00000506188 PPTC7Q8NI37 304 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 KCNB2Q92953 911 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 EMID1Q96A84 441 aaPredicted RBP16.12■□□□□ 0.17
SNHG4-203ENST00000506188 RNPC3Q96LT9 517 aaKnown RBP16.12■□□□□ 0.17
SNHG4-203ENST00000506188 TCEANC2Q96MN5 208 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 PPP1R12CQ9BZL4 782 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 ALDH8A1Q9H2A2 487 aaPredicted RBP16.12■□□□□ 0.17
SNHG4-203ENST00000506188 SNX14Q9Y5W7 946 aa16.12■□□□□ 0.17
SNHG4-203ENST00000506188 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
SNHG4-203ENST00000506188 ARIH2O95376 493 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 CD4P01730 458 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 MMP3P08254 477 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 NAPAP54920 295 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 ARHGAP1Q07960 439 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 SHHQ15465 462 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 NBPF20Q3BBV1 942 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 PSRC1Q6PGN9 363 aaPredicted RBP16.11■□□□□ 0.17
SNHG4-203ENST00000506188 Q6ZUG5 572 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 C7orf31Q8N865 590 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
SNHG4-203ENST00000506188 SPATA33Q96N06 139 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 TRPV6Q9H1D0 765 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
SNHG4-203ENST00000506188 V9GY48 417 aaPredicted RBP16.11■□□□□ 0.17
SNHG4-203ENST00000506188 FIBPO43427 364 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 GGPS1O95749 300 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 FOSP01100 380 aaPredicted RBP16.1■□□□□ 0.17
SNHG4-203ENST00000506188 PTGS1P23219 599 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 RPS6KB1P23443 525 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 BFSP2Q13515 415 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 CELF3Q5SZQ8 465 aaKnown RBP16.1■□□□□ 0.17
SNHG4-203ENST00000506188 PCNX4Q63HM2 1172 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 MCTP2Q6DN12 878 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 PPP1R18Q6NYC8 613 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 USP17L6PQ6QN14 398 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 BRF1Q92994 677 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
SNHG4-203ENST00000506188 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
SNHG4-203ENST00000506188 B4GALT4O60513 344 aa16.09■□□□□ 0.17
SNHG4-203ENST00000506188 MYSM1Q5VVJ2 828 aa16.09■□□□□ 0.17
SNHG4-203ENST00000506188 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
SNHG4-203ENST00000506188 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
SNHG4-203ENST00000506188 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
SNHG4-203ENST00000506188 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.17
SNHG4-203ENST00000506188 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.17
SNHG4-203ENST00000506188 SMCHD1A6NHR9 2005 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 MEIS2O14770 477 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 MAFGO15525 162 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 CSF2RAP15509 400 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 ITGB8P26012 769 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 CYP2C18P33260 490 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 ADCY7P51828 1080 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 APOBRQ0VD83 1088 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 RUFY3Q7L099 469 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
SNHG4-203ENST00000506188 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
SNHG4-203ENST00000506188 GRIN2DO15399 1336 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms