RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 TMEM92Q6UXU6 159 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 TMEM184AQ6ZMB5 413 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.18□□□□□ -1.58
CPNE4-204ENST00000505331 G2E3Q7L622 706 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 MAPKAPK5Q8IW41 473 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 SH3RF3Q8TEJ3 882 aaPredicted RBP5.18□□□□□ -1.58
CPNE4-204ENST00000505331 ZNF384Q8TF68 577 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 TGFBRAP1Q8WUH2 860 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 CLP1Q92989 425 aaKnown RBP5.18□□□□□ -1.58
CPNE4-204ENST00000505331 P2RX5Q93086 422 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 FGD4Q96M96 766 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 NECTIN4Q96NY8 510 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 TEX13BQ9BXU2 312 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 ADAM33Q9BZ11 813 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 TLE6Q9H808 572 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 RXFP3Q9NSD7 469 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 IFT57Q9NWB7 429 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 C9orf78Q9NZ63 289 aaPredicted RBP5.18□□□□□ -1.58
CPNE4-204ENST00000505331 LIMD1Q9UGP4 676 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 FBXO4Q9UKT5 387 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 FLT1P17948 1338 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 EMSYQ7Z589 1322 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 SIP14410 1827 aa5.18□□□□□ -1.58
CPNE4-204ENST00000505331 DLG5Q8TDM6 1919 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 ASB14A6NK59 587 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 WDR46O15213 610 aaKnown RBP5.17□□□□□ -1.58
CPNE4-204ENST00000505331 KRT38O76015 456 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 UPP2O95045 317 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 PTGS1P23219 599 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 GUCY1A2P33402 732 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 PHKA1P46020 1223 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 GNAI1P63096 354 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 SPEM2Q0P670 501 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 TDGQ13569 410 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 BRDTQ58F21 947 aaPredicted RBP5.17□□□□□ -1.58
CPNE4-204ENST00000505331 SPECC1Q5M775 1068 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 ANKRD54Q6NXT1 300 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 MAML2Q8IZL2 1156 aaPredicted RBP5.17□□□□□ -1.58
CPNE4-204ENST00000505331 ANKRD35Q8N283 1001 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 FAM133AQ8N9E0 248 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 TDRD5Q8NAT2 981 aaKnown RBP5.17□□□□□ -1.58
CPNE4-204ENST00000505331 ZBTB44Q8NCP5 570 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 REPS2Q8NFH8 660 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 DBF4BQ8NFT6 615 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 GATA6Q92908 595 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 NSUN4Q96CB9 384 aaKnown RBP5.17□□□□□ -1.58
CPNE4-204ENST00000505331 IFIH1Q9BYX4 1025 aaKnown RBP5.17□□□□□ -1.58
CPNE4-204ENST00000505331 EHD4Q9H223 541 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 DLGAP2Q9P1A6 1054 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 WNT16Q9UBV4 365 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 SERPINB13Q9UIV8 391 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 DUSP12Q9UNI6 340 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 SIT1Q9Y3P8 196 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 COL4A3Q01955 1670 aa5.17□□□□□ -1.58
CPNE4-204ENST00000505331 USP17L12C9JPN9 530 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 USP17L21D6R901 530 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 TM4SF5O14894 197 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 ARHGAP6O43182 974 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 LILRB5O75023 590 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 NTRK1P04629 796 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 DCNP07585 359 aaKnown RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 DNAJB1P25685 340 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 TECP42680 631 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 LIMK1P53667 647 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 CALD1Q05682 793 aaKnown RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 RASGRF1Q13972 1273 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SEPT2Q15019 361 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 CSRP2Q16527 193 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 ATP2B3Q16720 1220 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 DUSP6Q16828 381 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 RABL6Q3YEC7 729 aaPredicted RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 DUSP28Q4G0W2 176 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 KIAA1755Q5JYT7 1200 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 CCDC102BQ68D86 513 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SNRNP48Q6IEG0 339 aaKnown RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 PHLDB3Q6NSJ2 640 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 CES5AQ6NT32 575 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 TAPT1Q6NXT6 567 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SYCE2Q6PIF2 218 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 TRAF7Q6Q0C0 670 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 PRR23CQ6ZRP0 262 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SESTD1Q86VW0 696 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SPICE1Q8N0Z3 855 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 VN1R2Q8NFZ6 395 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SPPL3Q8TCT6 385 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 DHX38Q92620 1227 aaKnown RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 MAP4K1Q92918 833 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 KAZALD1Q96I82 304 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SUCLG2Q96I99 432 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 BBC3Q96PG8 261 aaPredicted RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 CTAGE1Q96RT6 745 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 POMKQ9H5K3 350 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SH2D4AQ9H788 454 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 VCPKMTQ9H867 229 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 ZSWIM6Q9HCJ5 1215 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SEMA4GQ9NTN9 838 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 ZSCAN32Q9NX65 697 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 FBXO40Q9UH90 709 aa5.16□□□□□ -1.58
CPNE4-204ENST00000505331 SAP30BPQ9UHR5 308 aaKnown RBP5.16□□□□□ -1.58
CPNE4-204ENST00000505331 PPP1R9AQ9ULJ8 1098 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms