RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 LINC01553A4QN01 128 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 FGRP09769 529 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 SDSP20132 328 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 BAATQ14032 418 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 PPP2R5BQ15173 497 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 PTGISQ16647 500 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 POTEBQ6S5H4 581 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 EXOC6Q8TAG9 804 aa18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 RNF41Q9H4P4 317 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-213ENST00000505074 LAMA4Q16363 1823 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 ABHD14A-ACY1A0A1B0GW23 586 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 A6NJR5 290 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 IGHDP01880 384 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 CWC27Q6UX04 472 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 TBC1D10CQ8IV04 446 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 PLEKHM2Q8IWE5 1019 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 ESR2Q92731 530 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 RANBP17Q9H2T7 1088 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 FAM50BQ9Y247 325 aa18.77■□□□□ 0.6
PDLIM7-213ENST00000505074 PTPDC1A2A3K4 754 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 ZNF213O14771 459 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 EFCAB14O75071 495 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 SELPP16109 830 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 NOVP48745 357 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 NUCB1Q02818 461 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 GPNMBQ14956 572 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 LRRC8DQ7L1W4 858 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 FBXO22Q8NEZ5 403 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 NEK9Q8TD19 979 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 MPHOSPH6Q99547 160 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 ZKSCAN3Q9BRR0 538 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 TCP11L1Q9NUJ3 509 aa18.76■□□□□ 0.59
PDLIM7-213ENST00000505074 NEDD4P46934 1319 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 PDHBP11177 359 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 PCP11498 1178 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 IKBKEQ14164 716 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 PTPROQ16827 1216 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 SCFD2Q8WU76 684 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 MFSD14AQ96MC6 490 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 PRKAG3Q9UGI9 489 aa18.75■□□□□ 0.59
PDLIM7-213ENST00000505074 ZNF318Q5VUA4 2279 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 HIP1O00291 1037 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 NFIBO00712 420 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 CXCL10P02778 98 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 CALML3P27482 149 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 PDE4DQ08499 809 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 FAM117BQ6P1L5 589 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 BTNL9Q6UXG8 535 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 COPS5Q92905 334 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 MRPL38Q96DV4 380 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 INSL6Q9Y581 213 aa18.74■□□□□ 0.59
PDLIM7-213ENST00000505074 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 ZNF543Q08ER8 600 aa18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 GDF6Q6KF10 455 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 SESTD1Q86VW0 696 aa18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 TTC14Q96N46 770 aa18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 C17orf80Q9BSJ5 609 aa18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
PDLIM7-213ENST00000505074 NBNO60934 754 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 KDM4AO75164 1064 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 GOLGA8HP0CJ92 632 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 ZP2Q05996 745 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 RBL2Q08999 1139 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 USH1GQ495M9 461 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 TIGD5Q53EQ6 642 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 SLC30A10Q6XR72 485 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 EP400NLQ6ZTU2 488 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 HFE2Q6ZVN8 426 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 KAT14Q9H8E8 782 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 MICAL3Q7RTP6 2002 aa18.72■□□□□ 0.59
PDLIM7-213ENST00000505074 NLRC5Q86WI3 1866 aa18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 B4DLN1 442 aa18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 CKBP12277 381 aa18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 MRPL12P52815 198 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 IMMTQ16891 758 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 RNF207Q6ZRF8 634 aa18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 PABPC5Q96DU9 382 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 PNMA2Q9UL42 364 aa18.71■□□□□ 0.59
PDLIM7-213ENST00000505074 C19orf67A6NJJ6 358 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 B4E1Z4 1266 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 CCDC178Q5BJE1 867 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 GPATCH4Q5T3I0 446 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 ADHFE1Q8IWW8 467 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 PNMA1Q8ND90 353 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 SAMD11Q96NU1 681 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 UBA5Q9GZZ9 404 aa18.7■□□□□ 0.58
PDLIM7-213ENST00000505074 EDNRBP24530 442 aa18.69■□□□□ 0.58
PDLIM7-213ENST00000505074 DGKHQ86XP1 1220 aa18.69■□□□□ 0.58
PDLIM7-213ENST00000505074 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms