RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 JCADQ9P266 1359 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 ZNF609O15014 1411 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 KCNQ2O43526 872 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNX25-203ENST00000504959 HTR3BO95264 441 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 LARGE1O95461 756 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 MYCLP1P12525 358 aaPredicted RBP6.62□□□□□ -1.35
SNX25-203ENST00000504959 SYT1P21579 422 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 RPS6KB1P23443 525 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 ZNF445P59923 1031 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 TBC1D8BQ0IIM8 1120 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 TRIM28Q13263 835 aaKnown RBP6.62□□□□□ -1.35
SNX25-203ENST00000504959 TMEM67Q5HYA8 995 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 CCDC129Q6ZRS4 1044 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 NIM1KQ8IY84 436 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 ZSCAN1Q8NBB4 408 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 ZSWIM2Q8NEG5 633 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 HELLSQ9NRZ9 838 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 DNAJB12Q9NXW2 375 aaKnown RBP6.62□□□□□ -1.35
SNX25-203ENST00000504959 LRP6O75581 1613 aa6.62□□□□□ -1.35
SNX25-203ENST00000504959 PALLDQ8WX93 1383 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 RPAP1Q9BWH6 1393 aaPredicted RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 BCL9O00512 1426 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 VPS37CA5D8V6 355 aaPredicted RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 SOBPA7XYQ1 873 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 TPD52L2O43399 206 aaKnown RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 DNAJA2O60884 412 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 ESRRAP11474 423 aaPredicted RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 PDCP20941 246 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 GPTP24298 496 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 STAT3P40763 770 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 ME3Q16798 604 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 BRDTQ58F21 947 aaPredicted RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 VHLLQ6RSH7 139 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 EEPD1Q7L9B9 569 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 TICAM2Q86XR7 235 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 UBR7Q8N806 425 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 NECAB1Q8N987 351 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 ZNF669Q96BR6 464 aaPredicted RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 MFSD3Q96ES6 412 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 NEK1Q96PY6 1258 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 SEC62Q99442 399 aaKnown RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 PUS3Q9BZE2 481 aaKnown RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 ALDH8A1Q9H2A2 487 aaPredicted RBP6.61□□□□□ -1.35
SNX25-203ENST00000504959 TPCN1Q9ULQ1 816 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 SH3TC1Q8TE82 1336 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 DISP2A7MBM2 1401 aa6.61□□□□□ -1.35
SNX25-203ENST00000504959 A0A087X0B3 334 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 SYCE3A1L190 88 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 ANKRD18BA2A2Z9 1011 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 FAM86C2PA6NEL3 165 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 RNF113AO15541 343 aaKnown RBP6.6□□□□□ -1.35
SNX25-203ENST00000504959 ADAMTS2O95450 1211 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
SNX25-203ENST00000504959 TBX4P57082 545 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 STK3Q13188 491 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 HLFQ16534 295 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 SLC10A6Q3KNW5 377 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 METTL24Q5JXM2 366 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 HGSNATQ68CP4 663 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.6□□□□□ -1.35
SNX25-203ENST00000504959 NINJ1Q92982 152 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 TCEANC2Q96MN5 208 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 SPATA9Q9BWV2 254 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 PLA2G12BQ9BX93 195 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 ZC3H12CQ9C0D7 883 aaKnown RBP6.6□□□□□ -1.35
SNX25-203ENST00000504959 LACRTQ9GZZ8 138 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 CNNM1Q9NRU3 951 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 TRMT112Q9UI30 125 aaKnown RBP6.6□□□□□ -1.35
SNX25-203ENST00000504959 TRIM33Q9UPN9 1127 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 CNPY2Q9Y2B0 182 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 GFRA2O00451 464 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 ITGA6P23229 1130 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
SNX25-203ENST00000504959 PTSQ03393 145 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 DDB1Q16531 1140 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 FOXB2Q5VYV0 432 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 OVOS1Q6IE37 1185 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 LRSAM1Q6UWE0 723 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 UNC5AQ6ZN44 842 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 Q6ZUG5 572 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 ZSCAN30Q86W11 494 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
SNX25-203ENST00000504959 EMILIN2Q9BXX0 1053 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 UBE2OQ9C0C9 1292 aaKnown RBP6.6□□□□□ -1.35
SNX25-203ENST00000504959 NAGPAQ9UK23 515 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 SPATA31A6Q5VVP1 1343 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 CDHR2Q9BYE9 1310 aa6.6□□□□□ -1.35
SNX25-203ENST00000504959 ERVV-1B6SEH8 477 aa6.59□□□□□ -1.35
SNX25-203ENST00000504959 FIBPO43427 364 aa6.59□□□□□ -1.35
SNX25-203ENST00000504959 RRP9O43818 475 aaKnown RBP6.59□□□□□ -1.35
SNX25-203ENST00000504959 MAN1A2O60476 641 aa6.59□□□□□ -1.35
SNX25-203ENST00000504959 CHGBP05060 677 aa6.59□□□□□ -1.35
SNX25-203ENST00000504959 CSF1RP07333 972 aa6.59□□□□□ -1.35
SNX25-203ENST00000504959 CYP21A2P08686 494 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms