RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
GYPB-204ENST00000504951 CLEC10AQ8IUN9 316 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 CPXCR1Q8N123 301 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 PRSS33Q8NF86 280 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 GDPD5Q8WTR4 605 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 FTOQ9C0B1 505 aaKnown RBP eCLIP7.18□□□□□ -1.26
GYPB-204ENST00000504951 RAVER2Q9HCJ3 691 aaKnown RBP7.18□□□□□ -1.26
GYPB-204ENST00000504951 CYP39A1Q9NYL5 469 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 ARPP21Q9UBL0 812 aaPredicted RBP7.18□□□□□ -1.26
GYPB-204ENST00000504951 ADD3Q9UEY8 706 aaKnown RBP7.18□□□□□ -1.26
GYPB-204ENST00000504951 COG6Q9Y2V7 657 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
GYPB-204ENST00000504951 SCN5AQ14524 2016 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 COL4A6Q14031 1691 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 RB1P06400 928 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 BMP3P12645 472 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 RASA1P20936 1047 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 ADD2P35612 726 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 LTBRP36941 435 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 OS9Q13438 667 aaPredicted RBP7.17□□□□□ -1.26
GYPB-204ENST00000504951 IKBKEQ14164 716 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 CBX2Q14781 532 aaPredicted RBP7.17□□□□□ -1.26
GYPB-204ENST00000504951 HSP90AB4PQ58FF6 505 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 ZKSCAN2Q63HK3 967 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 SPRED2Q7Z698 418 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 BANK1Q8NDB2 785 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 STAG1Q8WVM7 1258 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 GMCL1Q96IK5 515 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 CTAGE1Q96RT6 745 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 WDR11Q9BZH6 1224 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 LMAN2LQ9H0V9 348 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 ZNF287Q9HBT7 754 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 PDGFCQ9NRA1 345 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 MTMR4Q9NYA4 1195 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 PNMA2Q9UL42 364 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 RAD50Q92878 1312 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 MYH8P13535 1937 aa7.17□□□□□ -1.26
GYPB-204ENST00000504951 SIP14410 1827 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 C5orf67F2Z3F1 127 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 PRKAB2O43741 272 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 GFRA3O60609 400 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 EYA4O95677 639 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 TTLL1O95922 423 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 EDNRBP24530 442 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 STAT2P52630 851 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 RCSD1Q6JBY9 416 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 TRIM67Q6ZTA4 783 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 LRRC47Q8N1G4 583 aaKnown RBP7.16□□□□□ -1.26
GYPB-204ENST00000504951 FBXL6Q8N531 539 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 KIFC2Q96AC6 838 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 TRERF1Q96PN7 1200 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 PHOX2BQ99453 314 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 NUP88Q99567 741 aaPredicted RBP7.16□□□□□ -1.26
GYPB-204ENST00000504951 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.16□□□□□ -1.26
GYPB-204ENST00000504951 NSUN3Q9H649 340 aaKnown RBP7.16□□□□□ -1.26
GYPB-204ENST00000504951 ARMT1Q9H993 441 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 RNF146Q9NTX7 359 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 PLIN4Q96Q06 1357 aa7.16□□□□□ -1.26
GYPB-204ENST00000504951 RIF1Q5UIP0 2472 aaKnown RBP7.16□□□□□ -1.26
GYPB-204ENST00000504951 COL4A4P53420 1690 aaPredicted RBP7.16□□□□□ -1.26
GYPB-204ENST00000504951 SPTBN4Q9H254 2564 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 TANC1Q9C0D5 1861 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 PTPRSQ13332 1948 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 TMEM221A6NGB7 291 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 M0R296 226 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 MBTPS2O43462 519 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 NBNO60934 754 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 NOVP48745 357 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 DEFB103AP81534 67 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 SMAD4Q13485 552 aaKnown RBP7.15□□□□□ -1.26
GYPB-204ENST00000504951 PTGISQ16647 500 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 EPC2Q52LR7 807 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 TMEM63BQ5T3F8 832 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 ZSCAN25Q6NSZ9 544 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 TRAF7Q6Q0C0 670 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 LRRC8DQ7L1W4 858 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 RNF135Q8IUD6 432 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 FBXO16Q8IX29 292 aaPredicted RBP7.15□□□□□ -1.26
GYPB-204ENST00000504951 DNERQ8NFT8 737 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 SCFD2Q8WU76 684 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 TOP1MTQ969P6 601 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 PBXIP1Q96AQ6 731 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 IL21Q9HBE4 155 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 MKNK2Q9HBH9 465 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 EXOC6BQ9Y2D4 811 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.26
GYPB-204ENST00000504951 ZFHX2Q9C0A1 2572 aaPredicted RBP7.15□□□□□ -1.26
GYPB-204ENST00000504951 EMSYQ7Z589 1322 aa7.15□□□□□ -1.26
GYPB-204ENST00000504951 TRIP12Q14669 1992 aaPredicted RBP7.15□□□□□ -1.27
GYPB-204ENST00000504951 FAM186AA6NE01 2351 aa7.15□□□□□ -1.27
GYPB-204ENST00000504951 TRIOO75962 3097 aa7.14□□□□□ -1.27
GYPB-204ENST00000504951 CYP2D7A0A087X1C5 515 aa7.14□□□□□ -1.27
GYPB-204ENST00000504951 B4DLN1 442 aa7.14□□□□□ -1.27
GYPB-204ENST00000504951 LOC730098B7Z3J9 87 aa7.14□□□□□ -1.27
GYPB-204ENST00000504951 TMEM232C9JQI7 657 aa7.14□□□□□ -1.27
GYPB-204ENST00000504951 H3BQ06 376 aaPredicted RBP7.14□□□□□ -1.27
GYPB-204ENST00000504951 NRG2O14511 850 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms