RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 EIF3JO75822 258 aaKnown RBP20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 MYL3P08590 195 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 POLR2MP0CAP2 368 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 CALM1P0DP23 149 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 CALM2P0DP24 149 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 CALM3P0DP25 149 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 GNAQP50148 359 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 FUT2Q10981 343 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 Q7L0L9 218 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 ZFP91Q96JP5 570 aaPredicted RBP20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 MTG1Q9BT17 334 aaPredicted RBP20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 TRPV6Q9H1D0 765 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 FAM217BQ9NTX9 383 aaPredicted RBP20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 COL6A3P12111 3177 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 B4GALT4O60513 344 aa20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 ARHGAP1Q07960 439 aa20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 PGM5Q15124 567 aa20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 LY6KQ17RY6 165 aa20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 FCHSD1Q86WN1 690 aa20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 DEFB123Q8N688 67 aa20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 ALDH8A1Q9H2A2 487 aaPredicted RBP20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 DDX41Q9UJV9 622 aaKnown RBP20.8■□□□□ 0.92
SH3TC1-208ENST00000504223 FRMPD4Q14CM0 1322 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 KLF18A0A0U1RQI7 1052 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 REC8O95072 547 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 CDC27P30260 824 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 BRDTQ58F21 947 aaPredicted RBP20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 USP17L6PQ6QN14 398 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 VSIG10LQ86VR7 867 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 PPP1R12CQ9BZL4 782 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 CDH23Q9H251 3354 aa20.79■□□□□ 0.92
SH3TC1-208ENST00000504223 MEIS2O14770 477 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 ZBTB43O43298 467 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 KPNA6O60684 536 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 GH1P01241 217 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 MYCLP12524 364 aaPredicted RBP20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 CSF2RAP15509 400 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 APOBRQ0VD83 1088 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 FAM109BQ6ICB4 259 aaPredicted RBP20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 Q6ZUG5 572 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 PPP1R13LQ8WUF5 828 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 GPKOWQ92917 476 aaPredicted RBP eCLIP20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 RNPC3Q96LT9 517 aaKnown RBP20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 USP26Q9BXU7 913 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 SEC63Q9UGP8 760 aaKnown RBP20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 UMODL1Q5DID0 1318 aa20.78■□□□□ 0.92
SH3TC1-208ENST00000504223 MMP3P08254 477 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 HMGB1P09429 215 aaKnown RBP20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 CYP2C18P33260 490 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 PPIGQ13427 754 aaKnown RBP eCLIP20.77■□□□□ 0.924e-7■■■□□ 17.9
SH3TC1-208ENST00000504223 RTN1Q16799 776 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 TYW1BQ6NUM6 668 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 TMEM199Q8N511 208 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 AFG1LQ8WV93 481 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.77■□□□□ 0.922e-10■■□□□ 12.5
SH3TC1-208ENST00000504223 NOC4LQ9BVI4 516 aaKnown RBP20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 TRMT13Q9NUP7 481 aaKnown RBP20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 MRVI1Q9Y6F6 885 aa20.77■□□□□ 0.92
SH3TC1-208ENST00000504223 GOLGA8AA7E2F4 631 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 GOLGA8BA8MQT2 603 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 RPS6KB1P23443 525 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 MRPS9P82933 396 aaKnown RBP20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 SMAD3P84022 425 aaKnown RBP20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 NBPF20Q3BBV1 942 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 BLOC1S2Q6QNY1 142 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 SYNE3Q6ZMZ3 975 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 BRF1Q92994 677 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 AGXT2Q9BYV1 514 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 MTMR10Q9NXD2 777 aa20.76■□□□□ 0.91
SH3TC1-208ENST00000504223 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 CASTP20810 708 aaKnown RBP20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 SP2Q02086 613 aa20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 TMEM240Q5SV17 173 aa20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 WWC2Q6AWC2 1192 aa20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 NFRKBQ6P4R8 1299 aa20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 WNT8AQ9H1J5 351 aa20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 RBM28Q9NW13 759 aaKnown RBP20.75■□□□□ 0.91
SH3TC1-208ENST00000504223 EPB41L2O43491 1005 aaKnown RBP20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 CCND2P30279 289 aa20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 PTPN11Q06124 597 aaPredicted RBP20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 SEMA3FQ13275 785 aa20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 UBE2SQ16763 222 aa20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 RASIP1Q5U651 963 aa20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 KAT2BQ92831 832 aa20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 BCAS3Q9H6U6 928 aa20.74■□□□□ 0.91
SH3TC1-208ENST00000504223 NID2Q14112 1375 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 SORBS3O60504 671 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 SUPT20HL2P0C7V6 817 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 ADD1P35611 737 aaKnown RBP20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 RCAN1P53805 252 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 LAMC2Q13753 1193 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 FAM47CQ5HY64 1035 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 PSRC1Q6PGN9 363 aaPredicted RBP20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 KCNV1Q6PIU1 500 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 HEATR3Q7Z4Q2 680 aa20.73■□□□□ 0.91
SH3TC1-208ENST00000504223 FBXL16Q8N461 479 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms