RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 C22orf46C9J442 243 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 SMAD7O15105 426 aaKnown RBP6.47□□□□□ -1.37
SUB1-204ENST00000504016 ZNF143P52747 638 aaPredicted RBP6.47□□□□□ -1.37
SUB1-204ENST00000504016 GTF2IRD2BQ6EKJ0 949 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 CD300LDQ6UXZ3 194 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 GTF2IRD2Q86UP8 949 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 MCF2L2Q86YR7 1114 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 ADAMTS17Q8TE56 1095 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 C11orf84Q9BUA3 381 aaPredicted RBP6.47□□□□□ -1.37
SUB1-204ENST00000504016 CYP26B1Q9NR63 512 aa6.47□□□□□ -1.37
SUB1-204ENST00000504016 SGSM2O43147 1006 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 PUM1Q14671 1186 aaKnown RBP eCLIP6.46□□□□□ -1.38
SUB1-204ENST00000504016 NCAPHQ15003 741 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 INF2Q27J81 1249 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 IQCEQ6IPM2 695 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 TRIM59Q8IWR1 403 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 SEC14L1Q92503 715 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 SYT3Q9BQG1 590 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 PPP1R1BQ9UD71 204 aaPredicted RBP6.46□□□□□ -1.38
SUB1-204ENST00000504016 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.38
SUB1-204ENST00000504016 ITGB3P05106 788 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 FGRP09769 529 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 RPL13P26373 211 aaKnown RBP6.45□□□□□ -1.38
SUB1-204ENST00000504016 THBS2P35442 1172 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 MAGEA10P43363 369 aaPredicted RBP6.45□□□□□ -1.38
SUB1-204ENST00000504016 RPL11P62913 178 aaKnown RBP6.45□□□□□ -1.38
SUB1-204ENST00000504016 RGL3Q3MIN7 710 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 MILR1Q7Z6M3 343 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 STK32CQ86UX6 486 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 ZC3H18Q86VM9 953 aaKnown RBP6.45□□□□□ -1.38
SUB1-204ENST00000504016 FAM26EQ8N5C1 309 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 KYQ8NBH2 561 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 FRS2Q8WU20 508 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 TANGO6Q9C0B7 1094 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 NKX2-4Q9H2Z4 354 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 ZNF408Q9H9D4 720 aa6.45□□□□□ -1.38
SUB1-204ENST00000504016 KIAA2012Q0VF49 1180 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 CEP68Q76N32 757 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 MIB1Q86YT6 1006 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 TTLL6Q8N841 843 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 SLC43A3Q8NBI5 491 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 MRGPRX3Q96LB0 322 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 SMPD4Q9NXE4 827 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 MYRFQ9Y2G1 1151 aa6.44□□□□□ -1.38
SUB1-204ENST00000504016 TIMM13Q9Y5L4 95 aaPredicted RBP6.44□□□□□ -1.38
SUB1-204ENST00000504016 FPR2P25090 351 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 MROH9Q5TGP6 573 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 LARP1BQ659C4 914 aaKnown RBP6.43□□□□□ -1.38
SUB1-204ENST00000504016 MCTP2Q6DN12 878 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 FAM124AQ86V42 546 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 NPLOC4Q8TAT6 608 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 BTN2A2Q8WVV5 523 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 DIO2Q92813 273 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 TRMT2BQ96GJ1 504 aaKnown RBP6.43□□□□□ -1.38
SUB1-204ENST00000504016 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 TMPRSS5Q9H3S3 457 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 LRP2BPQ9P2M1 347 aa6.43□□□□□ -1.38
SUB1-204ENST00000504016 MROH6A6NGR9 719 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 GTF2F1P35269 517 aaKnown RBP eCLIP6.42□□□□□ -1.38
SUB1-204ENST00000504016 BCL6P41182 706 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 ECI1P42126 302 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 SLC6A11P48066 632 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 E4F1Q66K89 784 aaPredicted RBP6.42□□□□□ -1.38
SUB1-204ENST00000504016 FAM126BQ8IXS8 530 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 LGI4Q8N135 537 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 HNRNPLLQ8WVV9 542 aaKnown RBP6.42□□□□□ -1.38
SUB1-204ENST00000504016 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.38
SUB1-204ENST00000504016 NGRNQ9NPE2 291 aaKnown RBP6.42□□□□□ -1.38
SUB1-204ENST00000504016 ST7Q9NRC1 585 aa6.42□□□□□ -1.38
SUB1-204ENST00000504016 MEFVO15553 781 aaPredicted RBP6.41□□□□□ -1.38
SUB1-204ENST00000504016 MYO1BO43795 1136 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 SNRPB2P08579 225 aaKnown RBP6.41□□□□□ -1.38
SUB1-204ENST00000504016 HOXC12P31275 282 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 STAT5AP42229 794 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 GTF2A2P52657 109 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 ITGA1P56199 1179 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 ADAM17P78536 824 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 CYP4F3Q08477 520 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 SV2CQ496J9 727 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 TBC1D10BQ4KMP7 808 aaPredicted RBP6.41□□□□□ -1.38
SUB1-204ENST00000504016 FAM26FQ5R3K3 315 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 BORAQ6PGQ7 559 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 RIOX2Q8IUF8 465 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 TMEM169Q96HH4 297 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 LOXL4Q96JB6 756 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 TMEFF2Q9UIK5 374 aaPredicted RBP6.41□□□□□ -1.38
SUB1-204ENST00000504016 COA3Q9Y2R0 106 aaPredicted RBP6.41□□□□□ -1.38
SUB1-204ENST00000504016 X6R8D5 127 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 ZNF536O15090 1300 aa6.41□□□□□ -1.38
SUB1-204ENST00000504016 B2RBV5 119 aa6.4□□□□□ -1.38
SUB1-204ENST00000504016 DDX3XO00571 662 aaKnown RBP eCLIP6.4□□□□□ -1.389e-16■□□□□ 9.9
SUB1-204ENST00000504016 PLATP00750 562 aa6.4□□□□□ -1.38
SUB1-204ENST00000504016 ATP2B1P20020 1258 aa6.4□□□□□ -1.38
SUB1-204ENST00000504016 NKX3-2P78367 333 aa6.4□□□□□ -1.38
SUB1-204ENST00000504016 C6orf15Q6UXA7 325 aaPredicted RBP6.4□□□□□ -1.38
SUB1-204ENST00000504016 CCDC103Q8IW40 242 aa6.4□□□□□ -1.38
SUB1-204ENST00000504016 TXNDC5Q8NBS9 432 aaKnown RBP6.4□□□□□ -1.38
SUB1-204ENST00000504016 MICAL1Q8TDZ2 1067 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms