RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 DDX11Q96FC9 970 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 OSBPL2Q9H1P3 480 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 PIF1Q9H611 641 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 C8BP07358 591 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 CYP2C8P10632 490 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 RPL13P26373 211 aaKnown RBP6.7□□□□□ -1.34
UBE3D-205ENST00000503942 THBS2P35442 1172 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 POU4F1Q01851 419 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 CDSNQ15517 529 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 BORAQ6PGQ7 559 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 KISS1RQ969F8 398 aaPredicted RBP6.7□□□□□ -1.34
UBE3D-205ENST00000503942 GORASP1Q9BQQ3 440 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 TRIM55Q9BYV6 548 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 ST7Q9NRC1 585 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 ST6GALNAC2Q9UJ37 374 aa6.7□□□□□ -1.34
UBE3D-205ENST00000503942 ZBTB7AO95365 584 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 CD247P20963 164 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 DDR2Q16832 855 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 EEF1DP3Q658K8 133 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 LARP1BQ659C4 914 aaKnown RBP6.69□□□□□ -1.34
UBE3D-205ENST00000503942 GLB1LQ6UWU2 654 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 FAM124AQ86V42 546 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 ZFPM1Q8IX07 1006 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 SLITRK6Q9H5Y7 841 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 NOL6Q9H6R4 1146 aaKnown RBP6.69□□□□□ -1.34
UBE3D-205ENST00000503942 ZSWIM4Q9H7M6 989 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 SIRPGQ9P1W8 387 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 R3HCC1Q9Y3T6 440 aaKnown RBP6.69□□□□□ -1.34
UBE3D-205ENST00000503942 RWDD3Q9Y3V2 267 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 ZNF451Q9Y4E5 1061 aa6.69□□□□□ -1.34
UBE3D-205ENST00000503942 MROH6A6NGR9 719 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 B2RBV5 119 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 ITGA4P13612 1032 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 FXNQ16595 210 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 C6orf15Q6UXA7 325 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-205ENST00000503942 KLHL6Q8WZ60 621 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 ZDHHC15Q96MV8 337 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 MTA3Q9BTC8 594 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 C11orf84Q9BUA3 381 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-205ENST00000503942 PCDH18Q9HCL0 1135 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 ZNF214Q9UL59 606 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-205ENST00000503942 PCDHB10Q9UN67 800 aa6.68□□□□□ -1.34
UBE3D-205ENST00000503942 A0A087WZG4 1122 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 FAM221BA6H8Z2 402 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 GJB6O95452 261 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 RASA3Q14644 834 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 BMS1Q14692 1282 aaKnown RBP6.67□□□□□ -1.34
UBE3D-205ENST00000503942 WWC2Q6AWC2 1192 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 MRM1Q6IN84 353 aaKnown RBP6.67□□□□□ -1.34
UBE3D-205ENST00000503942 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 MKL1Q969V6 931 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 CDK11AQ9UQ88 783 aaPredicted RBP6.67□□□□□ -1.34
UBE3D-205ENST00000503942 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 ZNF536O15090 1300 aa6.67□□□□□ -1.34
UBE3D-205ENST00000503942 FZD7O75084 574 aa6.66□□□□□ -1.34
UBE3D-205ENST00000503942 GIMAP6Q6P9H5 292 aa6.66□□□□□ -1.34
UBE3D-205ENST00000503942 FAM178BQ8IXR5 827 aa6.66□□□□□ -1.34
UBE3D-205ENST00000503942 KYQ8NBH2 561 aa6.66□□□□□ -1.34
UBE3D-205ENST00000503942 MCMBPQ9BTE3 642 aa6.66□□□□□ -1.34
UBE3D-205ENST00000503942 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
UBE3D-205ENST00000503942 SNTG2Q9NY99 539 aa6.66□□□□□ -1.34
UBE3D-205ENST00000503942 AURKAO14965 403 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 U2SURPO15042 1029 aaKnown RBP6.65□□□□□ -1.34
UBE3D-205ENST00000503942 PPP1R11O60927 126 aaPredicted RBP6.65□□□□□ -1.34
UBE3D-205ENST00000503942 DDAH1O94760 285 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 TP53P04637 393 aaPredicted RBP6.65□□□□□ -1.34
UBE3D-205ENST00000503942 VHLLQ6RSH7 139 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 USP51Q70EK9 711 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 ZNF747Q9BV97 191 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 CCDC113Q9H0I3 377 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 FAM86C1Q9NVL1 165 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 GULP1Q9UBP9 304 aa6.65□□□□□ -1.34
UBE3D-205ENST00000503942 DIS3Q9Y2L1 958 aaKnown RBP6.65□□□□□ -1.34
UBE3D-205ENST00000503942 CCDC85CA6NKD9 419 aa6.64□□□□□ -1.35
UBE3D-205ENST00000503942 CBFA2T2O43439 604 aa6.64□□□□□ -1.35
UBE3D-205ENST00000503942 ICAM4Q14773 271 aa6.64□□□□□ -1.35
UBE3D-205ENST00000503942 GNPTABQ3T906 1256 aa6.64□□□□□ -1.35
UBE3D-205ENST00000503942 NOP9Q86U38 636 aaKnown RBP6.64□□□□□ -1.35
UBE3D-205ENST00000503942 TXNDC5Q8NBS9 432 aaKnown RBP6.64□□□□□ -1.35
UBE3D-205ENST00000503942 SYT3Q9BQG1 590 aa6.64□□□□□ -1.35
UBE3D-205ENST00000503942 STXBP3O00186 592 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 LAMTOR5O43504 91 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 SLC7A5Q01650 507 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 CRB2Q5IJ48 1285 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 PRR31Q5SQ13 230 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 KIAA1211LQ6NV74 962 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 ETV3LQ6ZN32 361 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 LRP10Q7Z4F1 713 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 TTLL6Q8N841 843 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 SRPK1Q96SB4 655 aaKnown RBP6.63□□□□□ -1.35
UBE3D-205ENST00000503942 CDK5RAP1Q96SZ6 601 aaKnown RBP6.63□□□□□ -1.35
UBE3D-205ENST00000503942 KLC2Q9H0B6 622 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 PCED1AQ9H1Q7 454 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 VPS11Q9H270 941 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 CD248Q9HCU0 757 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms