RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CLIC5Q9NZA1 410 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 IL1RAPL1Q9NZN1 696 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 DDX20Q9UHI6 824 aaKnown RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 DNAI1Q9UI46 699 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 HOOK1Q9UJC3 728 aaKnown RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 FAM184BQ9ULE4 1060 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TTC7AQ9ULT0 858 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 PYCARDQ9ULZ3 195 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 R3HDM2Q9Y2K5 976 aaKnown RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 FAM169AQ9Y6X4 670 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 IVNS1ABPQ9Y6Y0 642 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TUBGCP6Q96RT7 1819 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 HTR3EA5X5Y0 456 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 MGRN1O60291 552 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SMIM24O75264 130 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SKAP2O75563 359 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 GFPT2O94808 682 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 NPTXRO95502 500 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 LDHBP07195 334 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 VIMP08670 466 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 ALDH3A1P30838 453 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 POLR2FP61218 127 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 AP2B1P63010 937 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 LSM11P83369 360 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SULT2A1Q06520 285 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 ITGA7Q13683 1181 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 NAA30Q147X3 362 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 FAM117BQ6P1L5 589 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 BZW1Q7L1Q6 419 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 YTHDF3Q7Z739 585 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SNX32Q86XE0 403 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 USHBP1Q8N6Y0 703 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SPERTQ8NA61 448 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 CCHCR1Q8TD31 782 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 DYDC1Q8WWB3 177 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 MAIP1Q8WWC4 291 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SGCDQ92629 289 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 ARHGEF2Q92974 986 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SYTL4Q96C24 671 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 CEP95Q96GE4 821 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 DDX27Q96GQ7 796 aaKnown RBP7.18□□□□□ -1.26
CLCN3-203ENST00000502998 ABHD8Q96I13 439 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 HERC2P3Q9BVR0 1158 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 YIPF3Q9GZM5 350 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 SLC5A4Q9NY91 659 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 CNPY2Q9Y2B0 182 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 RABGAP1Q9Y3P9 1069 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 CAPN7Q9Y6W3 813 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 PNPLA7Q6ZV29 1317 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 NSD2O96028 1365 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 NSD3Q9BZ95 1437 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 ATP10DQ9P241 1426 aa7.18□□□□□ -1.26
CLCN3-203ENST00000502998 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 YEATS4O95619 227 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 TBC1D8O95759 1140 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 CASP2P42575 452 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 MXI1P50539 228 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 GUCY2FP51841 1108 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 BLVRAP53004 296 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 PDE1BQ01064 536 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 BLMHQ13867 455 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 RAPGEF1Q13905 1077 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 LRP8Q14114 963 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 TPD52L1Q16890 204 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-203ENST00000502998 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 TMEM53Q6P2H8 277 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 ZNF449Q6P9G9 518 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 PI16Q6UXB8 463 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 TMC4Q7Z404 712 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 SPARTQ8N0X7 666 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 C17orf53Q8N3J3 647 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-203ENST00000502998 FAM71BQ8TC56 605 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 RABGGTAQ92696 567 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 SKA1Q96BD8 255 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 MS4A4AQ96JQ5 239 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 PSKH2Q96QS6 385 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 MOV10L1Q9BXT6 1211 aaKnown RBP7.17□□□□□ -1.26
CLCN3-203ENST00000502998 PUS3Q9BZE2 481 aaKnown RBP7.17□□□□□ -1.26
CLCN3-203ENST00000502998 VCX3AQ9NNX9 186 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 ARFGAP3Q9NP61 516 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 GPR108Q9NPR9 543 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 CYLDQ9NQC7 956 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-203ENST00000502998 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-203ENST00000502998 WDR35Q9P2L0 1181 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 MYO1AQ9UBC5 1043 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 ATPIF1Q9UII2 106 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 GGA2Q9UJY4 613 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 DSEQ9UL01 958 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 EFR3BQ9Y2G0 817 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 LY75O60449 1722 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 FLT4P35916 1363 aa7.17□□□□□ -1.26
CLCN3-203ENST00000502998 ARPC4-TTLL3A0A0A6YYG9 625 aa7.16□□□□□ -1.26
CLCN3-203ENST00000502998 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
CLCN3-203ENST00000502998 E9PMD0 336 aa7.16□□□□□ -1.26
CLCN3-203ENST00000502998 IFRD1O00458 451 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-203ENST00000502998 NMT2O60551 498 aa7.16□□□□□ -1.26
CLCN3-203ENST00000502998 KCNJ13O60928 360 aa7.16□□□□□ -1.26
CLCN3-203ENST00000502998 TRPA1O75762 1119 aa7.16□□□□□ -1.26
CLCN3-203ENST00000502998 RASSF9O75901 435 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms