RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 VSIG10LQ86VR7 867 aa30.12■■■□□ 2.41
CCDC149-203ENST00000502801 FAM126BQ8IXS8 530 aa30.12■■■□□ 2.41
CCDC149-203ENST00000502801 A6NJR5 290 aa30.11■■■□□ 2.41
CCDC149-203ENST00000502801 EPB41L2O43491 1005 aaKnown RBP30.11■■■□□ 2.41
CCDC149-203ENST00000502801 Q6ZUG5 572 aa30.11■■■□□ 2.41
CCDC149-203ENST00000502801 DDX41Q9UJV9 622 aaKnown RBP30.11■■■□□ 2.41
CCDC149-203ENST00000502801 LAMA3Q16787 3333 aa30.11■■■□□ 2.41
CCDC149-203ENST00000502801 GH1P01241 217 aa30.1■■■□□ 2.41
CCDC149-203ENST00000502801 USP17L6PQ6QN14 398 aa30.1■■■□□ 2.41
CCDC149-203ENST00000502801 SMARCC2Q8TAQ2 1214 aa30.1■■■□□ 2.41
CCDC149-203ENST00000502801 TBX21Q9UL17 535 aa30.1■■■□□ 2.41
CCDC149-203ENST00000502801 NAP1L2Q9ULW6 460 aaPredicted RBP30.1■■■□□ 2.41
CCDC149-203ENST00000502801 MRVI1Q9Y6F6 885 aa30.1■■■□□ 2.41
CCDC149-203ENST00000502801 GOLGA8AA7E2F4 631 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 GOLGA8BA8MQT2 603 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 SOX1O00570 391 aaPredicted RBP30.09■■■□□ 2.41
CCDC149-203ENST00000502801 TLR3O15455 904 aaKnown RBP30.09■■■□□ 2.41
CCDC149-203ENST00000502801 RGS20O76081 388 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 RPS6KB1P23443 525 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 CCND2P30279 289 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 ARHGAP1Q07960 439 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 CNTNAP5Q8WYK1 1306 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 CUL5Q93034 780 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 ZFP91Q96JP5 570 aaPredicted RBP30.09■■■□□ 2.41
CCDC149-203ENST00000502801 MTG1Q9BT17 334 aaPredicted RBP30.09■■■□□ 2.41
CCDC149-203ENST00000502801 USP26Q9BXU7 913 aa30.09■■■□□ 2.41
CCDC149-203ENST00000502801 SCN10AQ9Y5Y9 1956 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 MEIS2O14770 477 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 CD4P01730 458 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 PSMA5P28066 241 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 APOBRQ0VD83 1088 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 AFG1LQ8WV93 481 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 BRF1Q92994 677 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 SEZ6LQ9BYH1 1024 aa30.08■■■□□ 2.41
CCDC149-203ENST00000502801 FAM217BQ9NTX9 383 aaPredicted RBP30.08■■■□□ 2.41
CCDC149-203ENST00000502801 FRMPD4Q14CM0 1322 aa30.07■■■□□ 2.4
CCDC149-203ENST00000502801 PIK3CDO00329 1044 aa30.07■■■□□ 2.4
CCDC149-203ENST00000502801 KPNA6O60684 536 aa30.07■■■□□ 2.4
CCDC149-203ENST00000502801 CASTP20810 708 aaKnown RBP30.07■■■□□ 2.4
CCDC149-203ENST00000502801 RCAN1P53805 252 aa30.07■■■□□ 2.4
CCDC149-203ENST00000502801 FUT2Q10981 343 aa30.07■■■□□ 2.4
CCDC149-203ENST00000502801 SZT2Q5T011 3432 aa30.06■■■□□ 2.4
CCDC149-203ENST00000502801 TIMP1P01033 207 aa30.06■■■□□ 2.4
CCDC149-203ENST00000502801 CDC27P30260 824 aa30.06■■■□□ 2.4
CCDC149-203ENST00000502801 LRIT3Q3SXY7 679 aa30.06■■■□□ 2.4
CCDC149-203ENST00000502801 HEATR3Q7Z4Q2 680 aa30.06■■■□□ 2.4
CCDC149-203ENST00000502801 GPKOWQ92917 476 aaPredicted RBP eCLIP30.06■■■□□ 2.4
CCDC149-203ENST00000502801 PSTPIP2Q9H939 334 aa30.06■■■□□ 2.4
CCDC149-203ENST00000502801 KCNV1Q6PIU1 500 aa30.05■■■□□ 2.4
CCDC149-203ENST00000502801 FBXL16Q8N461 479 aa30.05■■■□□ 2.4
CCDC149-203ENST00000502801 LRCH3Q96II8 777 aa30.05■■■□□ 2.4
CCDC149-203ENST00000502801 MMP3P08254 477 aa30.04■■■□□ 2.4
CCDC149-203ENST00000502801 MRPS9P82933 396 aaKnown RBP30.04■■■□□ 2.4
CCDC149-203ENST00000502801 EMID1Q96A84 441 aaPredicted RBP30.04■■■□□ 2.4
CCDC149-203ENST00000502801 AGXT2Q9BYV1 514 aa30.04■■■□□ 2.4
CCDC149-203ENST00000502801 TRPV6Q9H1D0 765 aa30.04■■■□□ 2.4
CCDC149-203ENST00000502801 V9GY48 417 aaPredicted RBP30.04■■■□□ 2.4
CCDC149-203ENST00000502801 B4GALT4O60513 344 aa30.03■■■□□ 2.4
CCDC149-203ENST00000502801 ADD1P35611 737 aaKnown RBP30.03■■■□□ 2.4
CCDC149-203ENST00000502801 METAP2P50579 478 aaKnown RBP eCLIP30.03■■■□□ 2.4
CCDC149-203ENST00000502801 LAMC2Q13753 1193 aa30.03■■■□□ 2.4
CCDC149-203ENST00000502801 SHHQ15465 462 aa30.03■■■□□ 2.4
CCDC149-203ENST00000502801 WWC2Q6AWC2 1192 aa30.03■■■□□ 2.4
CCDC149-203ENST00000502801 DHX37Q8IY37 1157 aaKnown RBP30.03■■■□□ 2.4
CCDC149-203ENST00000502801 ALDH8A1Q9H2A2 487 aaPredicted RBP30.03■■■□□ 2.4
CCDC149-203ENST00000502801 TGFB3P10600 412 aa30.02■■■□□ 2.4
CCDC149-203ENST00000502801 FPGSQ05932 587 aa30.02■■■□□ 2.4
CCDC149-203ENST00000502801 NBPF20Q3BBV1 942 aa30.02■■■□□ 2.4
CCDC149-203ENST00000502801 C9orf50Q5SZB4 431 aa30.02■■■□□ 2.4
CCDC149-203ENST00000502801 PPP1R12CQ9BZL4 782 aa30.02■■■□□ 2.4
CCDC149-203ENST00000502801 ZSWIM6Q9HCJ5 1215 aa30.02■■■□□ 2.4
CCDC149-203ENST00000502801 STAM2O75886 525 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 EPHB4P54760 987 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 SP2Q02086 613 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 UBE2SQ16763 222 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 MFSD5Q6N075 450 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 RUFY3Q7L099 469 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 PPP1R13LQ8WUF5 828 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 RTEL1Q9NZ71 1219 aa30.01■■■□□ 2.39
CCDC149-203ENST00000502801 CCDC196A0A1B0GTZ2 297 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 SORBS3O60504 671 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 GGPS1O95749 300 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 DGKDQ16760 1214 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 GNPTABQ3T906 1256 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 FAM47CQ5HY64 1035 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 CELF3Q5SZQ8 465 aaKnown RBP30■■■□□ 2.39
CCDC149-203ENST00000502801 MYSM1Q5VVJ2 828 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 PCNX4Q63HM2 1172 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 TYW1BQ6NUM6 668 aa30■■■□□ 2.39
CCDC149-203ENST00000502801 INPP4AQ96PE3 977 aaPredicted RBP30■■■□□ 2.39
CCDC149-203ENST00000502801 UBA1P22314 1058 aaKnown RBP29.99■■■□□ 2.39
CCDC149-203ENST00000502801 NAPAP54920 295 aa29.99■■■□□ 2.39
CCDC149-203ENST00000502801 CHMP4BP1P59074 171 aa29.99■■■□□ 2.39
CCDC149-203ENST00000502801 NFRKBQ6P4R8 1299 aa29.99■■■□□ 2.39
CCDC149-203ENST00000502801 PPTC7Q8NI37 304 aa29.99■■■□□ 2.39
CCDC149-203ENST00000502801 TRMT13Q9NUP7 481 aaKnown RBP29.99■■■□□ 2.39
CCDC149-203ENST00000502801 DOCK5Q9H7D0 1870 aa29.98■■■□□ 2.39
CCDC149-203ENST00000502801 ICAM3P32942 547 aa29.98■■■□□ 2.39
CCDC149-203ENST00000502801 CYP2C18P33260 490 aa29.98■■■□□ 2.39
CCDC149-203ENST00000502801 XRRA1Q6P2D8 792 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms