RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
SH3TC1-206ENST00000502669 E9PMD0 336 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 ATP8B1O43520 1251 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 RAPGEF1Q13905 1077 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 VWA3BQ502W6 1294 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 MYOCDQ8IZQ8 938 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 BBOX1O75936 387 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 RHBDL3P58872 404 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 ALS2CR12Q96Q35 445 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 C7orf25Q9BPX7 421 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 ADAM21Q9UKJ8 722 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 MEIS1O00470 390 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 PPEF1O14829 653 aaPredicted RBP16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 HNRNPH2P55795 449 aaKnown RBP16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 RASSF7Q02833 373 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 FAM26FQ5R3K3 315 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
SH3TC1-206ENST00000502669 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 LRRC53A6NM62 1247 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 M0R2N6 131 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 TRIM37O94972 964 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 MAP9Q49MG5 647 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 UNC13DQ70J99 1090 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 GPBP1Q86WP2 473 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 ZNF507Q8TCN5 953 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 DNAJC7Q99615 494 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 STAT3P40763 770 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 KIF11P52732 1056 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 BEND6Q5SZJ8 279 aaPredicted RBP16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 TXLNBQ8N3L3 684 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 POLR2FP61218 127 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 CYP4A11Q02928 519 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 MAN2A1Q16706 1144 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 PRR16Q569H4 304 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 MSL1Q68DK7 614 aa16.64■□□□□ 0.25
SH3TC1-206ENST00000502669 GYS1P13807 737 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 PPP1R2P41236 205 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 TMC4Q7Z404 712 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 PNMA6FA0A0J9YX94 578 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 POTEB3A0JP26 581 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 POTECB2RU33 542 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 EPHB6O15197 1021 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 IQCEQ6IPM2 695 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 POTEBQ6S5H4 581 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 SEPT12Q8IYM1 358 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 RAD54LQ92698 747 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 LSM14BQ9BX40 385 aaKnown RBP16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 BLOC1S4Q9NUP1 217 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 STK17AQ9UEE5 414 aa16.63■□□□□ 0.25
SH3TC1-206ENST00000502669 BCORQ6W2J9 1755 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 NCK2O43639 380 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 GDF11O95390 407 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 CYP2C19P33261 490 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 SLC7A5Q01650 507 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 PCDHA13Q9Y5I0 950 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 VAV2P52735 878 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 GFPT1Q06210 699 aaPredicted RBP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 NFIAQ12857 509 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 DCAF17Q5H9S7 520 aaPredicted RBP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 CCDC65Q8IXS2 484 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 TEKT1Q969V4 418 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 PNMA5Q96PV4 448 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 RABEP2Q9H5N1 569 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 TAL1P17542 331 aaPredicted RBP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 EHD2Q9NZN4 543 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 ARAP2Q8WZ64 1704 aa16.62■□□□□ 0.25
SH3TC1-206ENST00000502669 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 CCDC170Q8IYT3 715 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 NOP2P46087 812 aaKnown RBP16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 APBA1Q02410 837 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 PPARDQ03181 441 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 ZSCAN26Q16670 478 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 CHMP2AO43633 222 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms