RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 NPLOC4Q8TAT6 608 aa7.16□□□□□ -1.26
CCSER1-202ENST00000502478 KRTAP3-1Q9BYR8 98 aa7.16□□□□□ -1.26
CCSER1-202ENST00000502478 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
CCSER1-202ENST00000502478 CYP26B1Q9NR63 512 aa7.16□□□□□ -1.26
CCSER1-202ENST00000502478 STRIP2Q9ULQ0 834 aa7.16□□□□□ -1.26
CCSER1-202ENST00000502478 C22orf46C9J442 243 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 ITGA1P56199 1179 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 NCAPHQ15003 741 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 TBC1D10BQ4KMP7 808 aaPredicted RBP7.15□□□□□ -1.26
CCSER1-202ENST00000502478 ZC3H18Q86VM9 953 aaKnown RBP7.15□□□□□ -1.26
CCSER1-202ENST00000502478 RIOX2Q8IUF8 465 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 FAM126BQ8IXS8 530 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 TTLL6Q8N841 843 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 FRS2Q8WU20 508 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 SAMD11Q96NU1 681 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 BTG4Q9NY30 223 aa7.15□□□□□ -1.26
CCSER1-202ENST00000502478 KIAA2012Q0VF49 1180 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 MROH9Q5TGP6 573 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 IQCEQ6IPM2 695 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 CD300LDQ6UXZ3 194 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 LGI4Q8N135 537 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 C1QTNF3Q9BXJ4 246 aa7.14□□□□□ -1.27
CCSER1-202ENST00000502478 ZBTB7CA1YPR0 619 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 TNFRSF1AP19438 455 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 FPR2P25090 351 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 RPL11P62913 178 aaKnown RBP7.13□□□□□ -1.27
CCSER1-202ENST00000502478 C9orf131Q5VYM1 1079 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 E4F1Q66K89 784 aaPredicted RBP7.13□□□□□ -1.27
CCSER1-202ENST00000502478 LGR4Q9BXB1 951 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 TIMM13Q9Y5L4 95 aaPredicted RBP7.13□□□□□ -1.27
CCSER1-202ENST00000502478 X6R8D5 127 aa7.13□□□□□ -1.27
CCSER1-202ENST00000502478 MROH6A6NGR9 719 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 C1QTNF3-AMACRE9PGA6 284 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 CPZQ66K79 652 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 BORAQ6PGQ7 559 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 MILR1Q7Z6M3 343 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 FAM124AQ86V42 546 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 NLRP10Q86W26 655 aa7.12□□□□□ -1.27
CCSER1-202ENST00000502478 SSBP3Q9BWW4 388 aaPredicted RBP7.12□□□□□ -1.27
CCSER1-202ENST00000502478 NGRNQ9NPE2 291 aaKnown RBP7.12□□□□□ -1.27
CCSER1-202ENST00000502478 ZNF20P17024 532 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 MCTP2Q6DN12 878 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 STK32CQ86UX6 486 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 CCDC103Q8IW40 242 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 TXNDC5Q8NBS9 432 aaKnown RBP7.11□□□□□ -1.27
CCSER1-202ENST00000502478 BTN2A2Q8WVV5 523 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 PPP1R14AQ96A00 147 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 ANAPC16Q96DE5 110 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 LOXL4Q96JB6 756 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 C8orf49Q96NF6 230 aa7.11□□□□□ -1.27
CCSER1-202ENST00000502478 ARNTLO00327 626 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 MATN3O15232 486 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 SCG5P05408 212 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 STAT5AP42229 794 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 GTF2A2P52657 109 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 KCNAB2Q13303 367 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 TESK1Q15569 626 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 CR1LQ2VPA4 569 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 CEP68Q76N32 757 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 DIO2Q92813 273 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 TGIF2Q9GZN2 237 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 TMEFF2Q9UIK5 374 aaPredicted RBP7.1□□□□□ -1.27
CCSER1-202ENST00000502478 ZNF652Q9Y2D9 606 aa7.1□□□□□ -1.27
CCSER1-202ENST00000502478 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 DDX3XO00571 662 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCSER1-202ENST00000502478 TBX1O43435 398 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 ZNF28P17035 718 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 HOXC12P31275 282 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 BCL6P41182 706 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 ADAM9Q13443 819 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
CCSER1-202ENST00000502478 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
CCSER1-202ENST00000502478 MEFVO15553 781 aaPredicted RBP7.08□□□□□ -1.28
CCSER1-202ENST00000502478 MYO1BO43795 1136 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 NKX3-2P78367 333 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 ZXDAP98168 799 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 ACBD5Q5T8D3 534 aaPredicted RBP7.08□□□□□ -1.28
CCSER1-202ENST00000502478 ZNF227Q86WZ6 799 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 KREMEN2Q8NCW0 462 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 TMEM169Q96HH4 297 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 LCORQ96JN0 433 aaPredicted RBP7.08□□□□□ -1.28
CCSER1-202ENST00000502478 ACBD3Q9H3P7 528 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 FBXL7Q9UJT9 491 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 INPP5FQ9Y2H2 1132 aa7.08□□□□□ -1.28
CCSER1-202ENST00000502478 ITGAVP06756 1048 aa7.07□□□□□ -1.28
CCSER1-202ENST00000502478 SNRPB2P08579 225 aaKnown RBP7.07□□□□□ -1.28
CCSER1-202ENST00000502478 CHRNA2Q15822 529 aa7.07□□□□□ -1.28
CCSER1-202ENST00000502478 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
CCSER1-202ENST00000502478 RCBTB1Q8NDN9 531 aa7.07□□□□□ -1.28
CCSER1-202ENST00000502478 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
CCSER1-202ENST00000502478 YIPF4Q9BSR8 244 aa7.07□□□□□ -1.28
CCSER1-202ENST00000502478 COA3Q9Y2R0 106 aaPredicted RBP7.07□□□□□ -1.28
CCSER1-202ENST00000502478 B4GALT3O60512 393 aa7.06□□□□□ -1.28
CCSER1-202ENST00000502478 ECI1P42126 302 aa7.06□□□□□ -1.28
CCSER1-202ENST00000502478 EMC4Q5J8M3 183 aa7.06□□□□□ -1.28
CCSER1-202ENST00000502478 CCDC140Q96MF4 163 aa7.06□□□□□ -1.28
CCSER1-202ENST00000502478 YTHDC1Q96MU7 727 aaKnown RBP7.06□□□□□ -1.28
CCSER1-202ENST00000502478 DTLQ9NZJ0 730 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms