RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 STXBP2Q15833 593 aa18.49■□□□□ 0.55
LMNA-217ENST00000498722 SKOR2Q2VWA4 1001 aaPredicted RBP18.49■□□□□ 0.55
LMNA-217ENST00000498722 ZNF713Q8N859 430 aaPredicted RBP18.49■□□□□ 0.55
LMNA-217ENST00000498722 C11orf49Q9H6J7 331 aa18.49■□□□□ 0.55
LMNA-217ENST00000498722 SPC25Q9HBM1 224 aa18.49■□□□□ 0.55
LMNA-217ENST00000498722 MTMR6Q9Y217 621 aa18.49■□□□□ 0.55
LMNA-217ENST00000498722 TCHHQ07283 1943 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 STXBP3O00186 592 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 DNM1LO00429 736 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 ADCY6O43306 1168 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 PRPF3O43395 683 aaKnown RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 JAK2O60674 1132 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 DUSP11O75319 330 aaKnown RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 CTDNEP1O95476 244 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 NR3C2P08235 984 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 IFNAR1P17181 557 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 EDNRBP24530 442 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 ADCY7P51828 1080 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 SSRP1Q08945 709 aaKnown RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 UBE2SQ16763 222 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 PFKFB3Q16875 520 aaPredicted RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 TAPT1Q6NXT6 567 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 SEPT14Q6ZU15 432 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 RNF180Q86T96 592 aa18.48■□□□□ 0.55
LMNA-217ENST00000498722 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 RNF26Q9BY78 433 aaPredicted RBP18.48■□□□□ 0.55
LMNA-217ENST00000498722 SYNRGQ9UMZ2 1314 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 H3BQV1 296 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 C6orf222P0C671 652 aaPredicted RBP18.47■□□□□ 0.55
LMNA-217ENST00000498722 PGM5Q15124 567 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 LRRC41Q15345 812 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 NTRK3Q16288 839 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 IQSEC1Q6DN90 963 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 PPP1R18Q6NYC8 613 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 HTATIP2Q9BUP3 242 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 WDR11Q9BZH6 1224 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
LMNA-217ENST00000498722 SMCO2A6NFE2 343 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 SPDYE3A6NKU9 549 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 PIK3CDO00329 1044 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 MEIS2O14770 477 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 SMPD1P17405 629 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 CCND2P30279 289 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
LMNA-217ENST00000498722 TYW1BQ6NUM6 668 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 UBE2Q1Q7Z7E8 422 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 SCFD2Q8WU76 684 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
LMNA-217ENST00000498722 DPF3Q92784 378 aa18.46■□□□□ 0.55
LMNA-217ENST00000498722 SENP6Q9GZR1 1112 aaPredicted RBP18.46■□□□□ 0.55
LMNA-217ENST00000498722 DNAH12Q6ZR08 3092 aa18.45■□□□□ 0.54
LMNA-217ENST00000498722 TXNP10599 105 aaKnown RBP18.45■□□□□ 0.54
LMNA-217ENST00000498722 TTLL4Q14679 1199 aa18.45■□□□□ 0.54
LMNA-217ENST00000498722 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
LMNA-217ENST00000498722 IL31RAQ8NI17 732 aa18.45■□□□□ 0.54
LMNA-217ENST00000498722 FERMT2Q96AC1 680 aa18.45■□□□□ 0.54
LMNA-217ENST00000498722 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
LMNA-217ENST00000498722 RIC8AQ9NPQ8 531 aa18.45■□□□□ 0.54
LMNA-217ENST00000498722 DYNC1LI2O43237 492 aaPredicted RBP18.44■□□□□ 0.54
LMNA-217ENST00000498722 EIF3JO75822 258 aaKnown RBP18.44■□□□□ 0.54
LMNA-217ENST00000498722 PTGS1P23219 599 aa18.44■□□□□ 0.54
LMNA-217ENST00000498722 PKN1Q16512 942 aa18.44■□□□□ 0.54
LMNA-217ENST00000498722 GNASQ5JWF2 1037 aa18.44■□□□□ 0.54
LMNA-217ENST00000498722 TMEM63BQ5T3F8 832 aa18.44■□□□□ 0.54
LMNA-217ENST00000498722 ZSCAN16Q9H4T2 348 aaPredicted RBP18.44■□□□□ 0.54
LMNA-217ENST00000498722 EHMT1Q9H9B1 1298 aa18.44■□□□□ 0.54
LMNA-217ENST00000498722 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
LMNA-217ENST00000498722 MYADML2A6NDP7 307 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 TRAK2O60296 914 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 ADAMTS4O75173 837 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 DEXIO95424 95 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 GJA9P57773 515 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 IRX5P78411 483 aaPredicted RBP18.43■□□□□ 0.54
LMNA-217ENST00000498722 BEX3Q00994 111 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 DUSP28Q4G0W2 176 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 CCDC148Q8NFR7 591 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 OR6J1Q8NGC5 347 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 GLT8D2Q9H1C3 349 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 VPS54Q9P1Q0 977 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 GNEQ9Y223 722 aaKnown RBP18.43■□□□□ 0.54
LMNA-217ENST00000498722 MRVI1Q9Y6F6 885 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 STK36Q9NRP7 1315 aa18.43■□□□□ 0.54
LMNA-217ENST00000498722 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
LMNA-217ENST00000498722 DTNBO60941 627 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 ATN1P54259 1190 aaPredicted RBP18.42■□□□□ 0.54
LMNA-217ENST00000498722 KCNA10Q16322 511 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 FSCN1Q16658 493 aaKnown RBP18.42■□□□□ 0.54
LMNA-217ENST00000498722 VSIG10LQ86VR7 867 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 PCSK9Q8NBP7 692 aaKnown RBP18.42■□□□□ 0.54
LMNA-217ENST00000498722 WASF1Q92558 559 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 VTI1AQ96AJ9 217 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 PGBD1Q96JS3 809 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 UPF3AQ9H1J1 476 aaKnown RBP18.42■□□□□ 0.54
LMNA-217ENST00000498722 RTEL1Q9NZ71 1219 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms