RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
LSAMP-206ENST00000498645 IFIT3O14879 490 aaKnown RBP12.83□□□□□ -0.36
LSAMP-206ENST00000498645 ZBTB5O15062 677 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
LSAMP-206ENST00000498645 NR3C2P08235 984 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 MYCLP12524 364 aaPredicted RBP12.83□□□□□ -0.36
LSAMP-206ENST00000498645 ATP2A2P16615 1042 aaKnown RBP12.83□□□□□ -0.36
LSAMP-206ENST00000498645 CHMLP26374 656 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 HOXA13P31271 388 aaPredicted RBP12.83□□□□□ -0.36
LSAMP-206ENST00000498645 BFSP2Q13515 415 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
LSAMP-206ENST00000498645 PTGISQ16647 500 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 VWCEQ96DN2 955 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 SENP2Q9HC62 589 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 MRVI1Q9Y6F6 885 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 TET1Q8NFU7 2136 aa12.83□□□□□ -0.36
LSAMP-206ENST00000498645 OPLAHO14841 1288 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
LSAMP-206ENST00000498645 PFKMP08237 780 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 ACTN1P12814 892 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
LSAMP-206ENST00000498645 HSD17B4P51659 736 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 PTPN11Q06124 597 aaPredicted RBP12.82□□□□□ -0.36
LSAMP-206ENST00000498645 GRM4Q14833 912 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 WTAPQ15007 396 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
LSAMP-206ENST00000498645 DGKDQ16760 1214 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 PIBF1Q8WXW3 757 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 PIGSQ96S52 555 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 MAF1Q9H063 256 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 TTC28Q96AY4 2481 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 TRANK1O15050 2925 aa12.82□□□□□ -0.36
LSAMP-206ENST00000498645 PALM3A6NDB9 673 aaPredicted RBP12.81□□□□□ -0.36
LSAMP-206ENST00000498645 E7EWF7 191 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 IQCF3P0C7M6 154 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 RFC2P35250 354 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 ADGRE1Q14246 886 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 TMEM67Q5HYA8 995 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 GDF6Q6KF10 455 aaPredicted RBP12.81□□□□□ -0.36
LSAMP-206ENST00000498645 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
LSAMP-206ENST00000498645 CCDC155Q8N6L0 562 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 NCOA7Q8NI08 942 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 KAT2BQ92831 832 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
LSAMP-206ENST00000498645 PDCD2LQ9BRP1 358 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 DDX41Q9UJV9 622 aaKnown RBP12.81□□□□□ -0.36
LSAMP-206ENST00000498645 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 REV3LO60673 3130 aa12.81□□□□□ -0.36
LSAMP-206ENST00000498645 DOCK5Q9H7D0 1870 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 CA3P07451 260 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 MFSD10Q14728 455 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 PGM5Q15124 567 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 SLC35G1Q2M3R5 365 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 IL31RAQ8NI17 732 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 MTMR8Q96EF0 704 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 CERS4Q9HA82 394 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 HDAC6Q9UBN7 1215 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 PTPRSQ13332 1948 aa12.8□□□□□ -0.36
LSAMP-206ENST00000498645 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
LSAMP-206ENST00000498645 SGSM2O43147 1006 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 GGPS1O95749 300 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 PSEN2P49810 448 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 LAMC2Q13753 1193 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 KIAA0753Q2KHM9 967 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 CATIPQ7Z7H3 387 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 PPTC7Q8NI37 304 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 SLC9A7Q96T83 725 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 MYL10Q9BUA6 226 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 KATNAL1Q9BW62 490 aa12.79□□□□□ -0.36
LSAMP-206ENST00000498645 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
LSAMP-206ENST00000498645 SPTBN5Q9NRC6 3674 aaKnown RBP12.78□□□□□ -0.36
LSAMP-206ENST00000498645 RBAK-RBAKDNI3L0D1 243 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 CYTH3O43739 400 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 RGS20O76081 388 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 SELPP16109 830 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 CCND2P30279 289 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 KCNJ6P48051 423 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 ANTXR2P58335 489 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 GHRHRQ02643 423 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 TRAF1Q13077 416 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 TJAP1Q5JTD0 557 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 LRRC8DQ7L1W4 858 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 DHX38Q92620 1227 aaKnown RBP12.78□□□□□ -0.36
LSAMP-206ENST00000498645 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.36
LSAMP-206ENST00000498645 EMID1Q96A84 441 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms