RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 IWS1Q96ST2 819 aa20.49■□□□□ 0.87
SMIM19-206ENST00000498447 FTOQ9C0B1 505 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMIM19-206ENST00000498447 JMJD4Q9H9V9 463 aa20.49■□□□□ 0.87
SMIM19-206ENST00000498447 PRRC2BQ5JSZ5 2229 aaKnown RBP20.48■□□□□ 0.87
SMIM19-206ENST00000498447 PTGISQ16647 500 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 CHST3Q7LGC8 479 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 SESTD1Q86VW0 696 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 MICALL1Q8N3F8 863 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 PHOSPHO2Q8TCD6 241 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 KAT2BQ92831 832 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 KRT23Q9C075 422 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 VAT1LQ9HCJ6 419 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 CTNNA3Q9UI47 895 aa20.48■□□□□ 0.87
SMIM19-206ENST00000498447 TRIP12Q14669 1992 aaPredicted RBP20.48■□□□□ 0.87
SMIM19-206ENST00000498447 EIF2AK2P19525 551 aaKnown RBP20.47■□□□□ 0.87
SMIM19-206ENST00000498447 CASTP20810 708 aaKnown RBP20.47■□□□□ 0.87
SMIM19-206ENST00000498447 ARHGEF16Q5VV41 709 aa20.47■□□□□ 0.87
SMIM19-206ENST00000498447 GDF6Q6KF10 455 aaPredicted RBP20.47■□□□□ 0.87
SMIM19-206ENST00000498447 CCDC155Q8N6L0 562 aa20.47■□□□□ 0.87
SMIM19-206ENST00000498447 CAGE1Q8TC20 777 aa20.47■□□□□ 0.87
SMIM19-206ENST00000498447 ADAMTS19Q8TE59 1207 aa20.47■□□□□ 0.87
SMIM19-206ENST00000498447 CTAGE1Q96RT6 745 aa20.47■□□□□ 0.87
SMIM19-206ENST00000498447 UBAC1Q9BSL1 405 aa20.47■□□□□ 0.87
SMIM19-206ENST00000498447 BAIAP3O94812 1187 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 CFBP00751 764 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 HERC6Q8IVU3 1022 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 AFAP1L1Q8TED9 768 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 TSPYL2Q9H2G4 693 aaPredicted RBP20.46■□□□□ 0.87
SMIM19-206ENST00000498447 CNNM2Q9H8M5 875 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 CERS4Q9HA82 394 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 PXMP2Q9NR77 195 aa20.46■□□□□ 0.87
SMIM19-206ENST00000498447 DDX41Q9UJV9 622 aaKnown RBP20.46■□□□□ 0.87
SMIM19-206ENST00000498447 RFXAPO00287 272 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 OPLAHO14841 1288 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 EIF3JO75822 258 aaKnown RBP20.45■□□□□ 0.86
SMIM19-206ENST00000498447 DGKDQ16760 1214 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 IFIT1BQ5T764 474 aaKnown RBP20.45■□□□□ 0.86
SMIM19-206ENST00000498447 STAG2Q8N3U4 1231 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 DHX38Q92620 1227 aaKnown RBP20.45■□□□□ 0.86
SMIM19-206ENST00000498447 EMID1Q96A84 441 aaPredicted RBP20.45■□□□□ 0.86
SMIM19-206ENST00000498447 AMNQ9BXJ7 453 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
SMIM19-206ENST00000498447 EPOPA6NHQ4 379 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 ARHGEF15O94989 841 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 NR3C2P08235 984 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 SELPP16109 830 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 POU3F3P20264 500 aaPredicted RBP20.44■□□□□ 0.86
SMIM19-206ENST00000498447 HSD17B4P51659 736 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 GHRHRQ02643 423 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 LRRC8DQ7L1W4 858 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 EXOC6Q8TAG9 804 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 UHRF1Q96T88 793 aaPredicted RBP20.44■□□□□ 0.86
SMIM19-206ENST00000498447 IL25Q9H293 177 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 GTF2IRD1Q9UHL9 959 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 MTCH2Q9Y6C9 303 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 PTPRSQ13332 1948 aa20.44■□□□□ 0.86
SMIM19-206ENST00000498447 KIF28PB7ZC32 967 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 GTPBP6O43824 516 aaPredicted RBP20.43■□□□□ 0.86
SMIM19-206ENST00000498447 KCNJ6P48051 423 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 PSEN2P49810 448 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 TAP1Q03518 808 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 RBL2Q08999 1139 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 GPNMBQ14956 572 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 SEC23AQ15436 765 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 C7orf31Q8N865 590 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 PPTC7Q8NI37 304 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 ARNTL2Q8WYA1 636 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 MTMR8Q96EF0 704 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 KATNAL1Q9BW62 490 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
SMIM19-206ENST00000498447 PPP1R11O60927 126 aaPredicted RBP20.42■□□□□ 0.86
SMIM19-206ENST00000498447 F2P00734 622 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 ZNF286BP0CG31 522 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 WDR5P61964 334 aaKnown RBP20.42■□□□□ 0.86
SMIM19-206ENST00000498447 LAMC2Q13753 1193 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 SKIV2LQ15477 1246 aaKnown RBP20.42■□□□□ 0.86
SMIM19-206ENST00000498447 CYB5R4Q7L1T6 521 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 DHX37Q8IY37 1157 aaKnown RBP20.42■□□□□ 0.86
SMIM19-206ENST00000498447 PDCD2LQ9BRP1 358 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 ALG1Q9BT22 464 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 MAD2L2Q9UI95 211 aa20.42■□□□□ 0.86
SMIM19-206ENST00000498447 MYH7BA7E2Y1 1941 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 ZBTB5O15062 677 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 TLL1O43897 1013 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 PARNO95453 639 aaKnown RBP20.41■□□□□ 0.86
SMIM19-206ENST00000498447 CKBP12277 381 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 TFF2Q03403 129 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 MFSD10Q14728 455 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 KIAA0753Q2KHM9 967 aa20.41■□□□□ 0.86
SMIM19-206ENST00000498447 MAP3K20Q9NYL2 800 aaKnown RBP20.41■□□□□ 0.86
SMIM19-206ENST00000498447 HAS3O00219 553 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 NBNO60934 754 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 RGS20O76081 388 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 CXCL10P02778 98 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 MYCLP12524 364 aaPredicted RBP20.4■□□□□ 0.86
SMIM19-206ENST00000498447 KRT40Q6A162 431 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 CNKSR3Q6P9H4 555 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 STOX1Q6ZVD7 989 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms