RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 PIBF1Q8WXW3 757 aa23.58■■□□□ 1.37
LMBR1-219ENST00000498034 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.37
LMBR1-219ENST00000498034 PNMA6FA0A0J9YX94 578 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 RGS20O76081 388 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 PTPN11Q06124 597 aaPredicted RBP23.57■■□□□ 1.36
LMBR1-219ENST00000498034 PGM5Q15124 567 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 SKAP1Q86WV1 359 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 SAMD3Q8N6K7 520 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 MAFAQ8NHW3 353 aaPredicted RBP23.57■■□□□ 1.36
LMBR1-219ENST00000498034 IL31RAQ8NI17 732 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 ESYT1Q9BSJ8 1104 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 MYL10Q9BUA6 226 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 MTIF3Q9H2K0 278 aaKnown RBP23.57■■□□□ 1.36
LMBR1-219ENST00000498034 ZNF576Q9H609 170 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 LY9Q9HBG7 655 aa23.57■■□□□ 1.36
LMBR1-219ENST00000498034 GCOM1H8Y6P7 765 aaPredicted RBP23.56■■□□□ 1.36
LMBR1-219ENST00000498034 POLR2MP0CAP2 368 aa23.56■■□□□ 1.36
LMBR1-219ENST00000498034 FOSL2P15408 326 aa23.56■■□□□ 1.36
LMBR1-219ENST00000498034 TRAF1Q13077 416 aa23.56■■□□□ 1.36
LMBR1-219ENST00000498034 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
LMBR1-219ENST00000498034 FCHSD1Q86WN1 690 aa23.56■■□□□ 1.36
LMBR1-219ENST00000498034 ZNF654Q8IZM8 581 aa23.56■■□□□ 1.36
LMBR1-219ENST00000498034 KAT2BQ92831 832 aa23.56■■□□□ 1.36
LMBR1-219ENST00000498034 ZFP91Q96JP5 570 aaPredicted RBP23.56■■□□□ 1.36
LMBR1-219ENST00000498034 SLC27A2O14975 620 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 PRC1O43663 620 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 CASTP20810 708 aaKnown RBP23.55■■□□□ 1.36
LMBR1-219ENST00000498034 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 DEFB128Q7Z7B8 93 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 SCN5AQ14524 2016 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 MYH7BA7E2Y1 1941 aa23.55■■□□□ 1.36
LMBR1-219ENST00000498034 SORBS3O60504 671 aa23.54■■□□□ 1.36
LMBR1-219ENST00000498034 DGKDQ16760 1214 aa23.54■■□□□ 1.36
LMBR1-219ENST00000498034 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.54■■□□□ 1.36
LMBR1-219ENST00000498034 DHX37Q8IY37 1157 aaKnown RBP23.54■■□□□ 1.36
LMBR1-219ENST00000498034 EMID1Q96A84 441 aaPredicted RBP23.54■■□□□ 1.36
LMBR1-219ENST00000498034 NOD1Q9Y239 953 aa23.54■■□□□ 1.36
LMBR1-219ENST00000498034 ZBBXA8MT70 800 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 LAMC2Q13753 1193 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 PTGISQ16647 500 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 RETREG2Q8NC44 543 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 CTCFLQ8NI51 663 aaPredicted RBP23.53■■□□□ 1.36
LMBR1-219ENST00000498034 MAP3K14Q99558 947 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 MTA3Q9BTC8 594 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 MSRAQ9UJ68 235 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 GBF1Q92538 1859 aa23.53■■□□□ 1.36
LMBR1-219ENST00000498034 SH2B2O14492 632 aaPredicted RBP23.52■■□□□ 1.36
LMBR1-219ENST00000498034 DDAH1O94760 285 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 IQCF3P0C7M6 154 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 CCND2P30279 289 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 MCM5P33992 734 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 NECTIN1Q15223 517 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 CREB3L3Q68CJ9 461 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 GDF6Q6KF10 455 aaPredicted RBP23.52■■□□□ 1.36
LMBR1-219ENST00000498034 NFXL1Q6ZNB6 911 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 GPKOWQ92917 476 aaPredicted RBP eCLIP23.52■■□□□ 1.368e-11■□□□□ 8.7
LMBR1-219ENST00000498034 CTAGE1Q96RT6 745 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 ALG1Q9BT22 464 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 NKX2-4Q9H2Z4 354 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 ANO2Q9NQ90 1003 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 SLC4A7Q9Y6M7 1214 aa23.52■■□□□ 1.36
LMBR1-219ENST00000498034 PITPNM1O00562 1244 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 PFKMP08237 780 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 ZNF286BP0CG31 522 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 PSEN2P49810 448 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 SP2Q02086 613 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 RAB30Q15771 203 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 MYSM1Q5VVJ2 828 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 SESTD1Q86VW0 696 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 PPTC7Q8NI37 304 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 TMEM87BQ96K49 555 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 SPZ1Q9BXG8 430 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 HDAC6Q9UBN7 1215 aa23.51■■□□□ 1.35
LMBR1-219ENST00000498034 YBX2Q9Y2T7 364 aaKnown RBP23.51■■□□□ 1.35
LMBR1-219ENST00000498034 CCDC69A6NI79 296 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 PLEKHA8P1O95397 391 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 GGPS1O95749 300 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 RXRAP19793 462 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 KIF5BP33176 963 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 RABGGTBP53611 331 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 BFSP2Q13515 415 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 CELF3Q5SZQ8 465 aaKnown RBP23.5■■□□□ 1.35
LMBR1-219ENST00000498034 KCNV1Q6PIU1 500 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 TMTC2Q8N394 836 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 RRP36Q96EU6 259 aaKnown RBP23.5■■□□□ 1.35
LMBR1-219ENST00000498034 LRRC2Q9BYS8 371 aa23.5■■□□□ 1.35
LMBR1-219ENST00000498034 TANC1Q9C0D5 1861 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 UBA1P22314 1058 aaKnown RBP23.49■■□□□ 1.35
LMBR1-219ENST00000498034 RFC2P35250 354 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 MFSD10Q14728 455 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 HSDL1Q3SXM5 330 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 BMP2KLQ5H9B9 411 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
LMBR1-219ENST00000498034 RAB11FIP4Q86YS3 637 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 CMTR1Q8N1G2 835 aaKnown RBP23.49■■□□□ 1.35
LMBR1-219ENST00000498034 SRBD1Q8N5C6 995 aaKnown RBP23.49■■□□□ 1.35
LMBR1-219ENST00000498034 SPATA33Q96N06 139 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 PRDM12Q9H4Q4 367 aa23.49■■□□□ 1.35
LMBR1-219ENST00000498034 GTF2IRD1Q9UHL9 959 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 1025.8 ms