RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 RARBP10826 455 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
ERCC8-208ENST00000497892 CCDC144BQ3MJ40 725 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 FBXO16Q8IX29 292 aaPredicted RBP12.97□□□□□ -0.33
ERCC8-208ENST00000497892 DIS3LQ8TF46 1054 aaKnown RBP12.97□□□□□ -0.33
ERCC8-208ENST00000497892 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
ERCC8-208ENST00000497892 LENG1Q96BZ8 264 aaPredicted RBP12.97□□□□□ -0.33
ERCC8-208ENST00000497892 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 ALDH8A1Q9H2A2 487 aaPredicted RBP12.97□□□□□ -0.33
ERCC8-208ENST00000497892 XPNPEP3Q9NQH7 507 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 FAM184BQ9ULE4 1060 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 VPS9D1Q9Y2B5 631 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 ALPK3Q96L96 1907 aa12.97□□□□□ -0.33
ERCC8-208ENST00000497892 SYNRGQ9UMZ2 1314 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 B4DLN1 442 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 DNM1LO00429 736 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 ADCY6O43306 1168 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 POLR2MP0CAP2 368 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 COL6A1P12109 1028 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 HOXA13P31271 388 aaPredicted RBP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 PDE4DQ08499 809 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 NTRK3Q16288 839 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.33
ERCC8-208ENST00000497892 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 PXMP2Q9NR77 195 aa12.96□□□□□ -0.33
ERCC8-208ENST00000497892 FRMPD4Q14CM0 1322 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 hCG_1984214I3L0E3 225 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 PIK3CDO00329 1044 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 DUSP11O75319 330 aaKnown RBP12.95□□□□□ -0.34
ERCC8-208ENST00000497892 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 AK2P54819 239 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
ERCC8-208ENST00000497892 ARRDC4Q8NCT1 418 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 IWS1Q96ST2 819 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 SLC4A5Q9BY07 1137 aa12.95□□□□□ -0.34
ERCC8-208ENST00000497892 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
ERCC8-208ENST00000497892 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
ERCC8-208ENST00000497892 V9GY48 417 aaPredicted RBP12.95□□□□□ -0.34
ERCC8-208ENST00000497892 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 RBM47A0AV96 593 aaKnown RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 MEIS2O14770 477 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 PGK1P00558 417 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 IFNAR1P17181 557 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 EIF2AK2P19525 551 aaKnown RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 CCT2P78371 535 aaKnown RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 LRRC41Q15345 812 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 PFKFB3Q16875 520 aaPredicted RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 ARHGEF16Q5VV41 709 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 TEX2Q8IWB9 1127 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 UPF3AQ9H1J1 476 aaKnown RBP12.94□□□□□ -0.34
ERCC8-208ENST00000497892 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 BARHL2Q9NY43 387 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 CEP290O15078 2479 aa12.94□□□□□ -0.34
ERCC8-208ENST00000497892 KBTBD13C9JR72 458 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 STXBP3O00186 592 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 PRPF3O43395 683 aaKnown RBP12.93□□□□□ -0.34
ERCC8-208ENST00000497892 SCG2P13521 617 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 SMPD1P17405 629 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 CST5P28325 142 aaPredicted RBP12.93□□□□□ -0.34
ERCC8-208ENST00000497892 NEK4P51957 841 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 NAPAP54920 295 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 NKX3-2P78367 333 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 PGM5Q15124 567 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 STXBP2Q15833 593 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
ERCC8-208ENST00000497892 IQSEC1Q6DN90 963 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 RNF180Q86T96 592 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 FCHSD1Q86WN1 690 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 SCFD2Q8WU76 684 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 CUL5Q93034 780 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 PHKBQ93100 1093 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 KIF2CQ99661 725 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 HTATIP2Q9BUP3 242 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 C22orf23Q9BZE7 217 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 PSTPIP2Q9H939 334 aa12.93□□□□□ -0.34
ERCC8-208ENST00000497892 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms