RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	FAM114A1	Q8IWE2	563 aa		11.66	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	LPIN2	Q92539	896 aa		11.66	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	CHMP6	Q96FZ7	201 aa		11.66	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	C15orf41	Q9Y2V0	281 aa		11.66	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	CHN1	P15882	459 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	MRPL12	P52815	198 aa	Known RBP	11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	ATP11A	P98196	1134 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	CDC37	Q16543	378 aa	Predicted RBP	11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	WLS	Q5T9L3	541 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	LRRC34	Q8IZ02	419 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	WHAMM	Q8TF30	809 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	MTR	Q99707	1265 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	VAT1L	Q9HCJ6	419 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	RGS16	O15492	202 aa	Predicted RBP	11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	FLT3	P36888	993 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	PLTP	P55058	493 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	ERVK-9	P63128	1117 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	TCERG1L	Q5VWI1	586 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	NELFCD	Q8IXH7	590 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	RETREG2	Q8NC44	543 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	GDAP1	Q8TB36	358 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	TMBIM4	Q9HC24	238 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	ABCF3	Q9NUQ8	709 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	TRIM33	Q9UPN9	1127 aa		11.65	□□□□□ -0.54
TRAPPC12-223	ENST00000497597	SOS2	Q07890	1332 aa	Predicted RBP	11.65	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SRGN	P10124	158 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	EPB41	P11171	864 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	GNAT1	P11488	350 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KLRC1	P26715	233 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	STK4	Q13043	487 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	UBE4A	Q14139	1066 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	INF2	Q27J81	1249 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	FAM47A	Q5JRC9	791 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PPP4R3A	Q6IN85	833 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ERICH1	Q86X53	443 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PLBD2	Q8NHP8	589 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	P2RX5	Q93086	422 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CAVIN3	Q969G5	261 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	HOOK2	Q96ED9	719 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TRIM51	Q9BSJ1	452 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PACSIN1	Q9BY11	444 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ECT2	Q9H8V3	914 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DNAJC17	Q9NVM6	304 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	MYO5B	Q9ULV0	1848 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DLC1	Q96QB1	1528 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TRAF5	O00463	557 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KIF3C	O14782	793 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	UBOX5	O94941	541 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SNUPN	O95149	360 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NEFH	P12036	1026 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CTCF	P49711	727 aa	Predicted RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ZNF844	Q08AG5	666 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KLHL30	Q0D2K2	578 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SLC9C1	Q4G0N8	1177 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SLC30A9	Q6PML9	568 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ADSSL1	Q8N142	457 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PRMT1	Q99873	361 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CNNM2	Q9H8M5	875 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LRRC4C	Q9HCJ2	640 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SWAP70	Q9UH65	585 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	USP31	Q70CQ4	1352 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	UTY	O14607	1347 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TMEM110-MUSTN1	A8MSY1	372 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TRAPPC3	O43617	180 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	BMP15	O95972	392 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CHRNA2	Q15822	529 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CCDC6	Q16204	474 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LETM2	Q2VYF4	491 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RABL6	Q3YEC7	729 aa	Predicted RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	HEATR3	Q7Z4Q2	680 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	FAM133A	Q8N9E0	248 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PIK3R5	Q8WYR1	880 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	XPO6	Q96QU8	1125 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PSMD1	Q99460	953 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DDX23	Q9BUQ8	820 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LSM14B	Q9BX40	385 aa	Known RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TCP11L1	Q9NUJ3	509 aa		11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.64	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TTI1	O43156	1089 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	HIP1R	O75146	1068 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RTN2	O75298	545 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SHBG	P04278	402 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	VEGFA	P15692	232 aa	Predicted RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CYP7A1	P22680	504 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DRP2	Q13474	957 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PLCB4	Q15147	1175 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KLHDC7A	Q5VTJ3	777 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LCORL	Q8N3X6	602 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NDST4	Q9H3R1	872 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	AZI2	Q9H6S1	392 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ETAA1	Q9NY74	926 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	BIN2	Q9UBW5	565 aa	Predicted RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CEMIP	Q8WUJ3	1361 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LRRD1	A4D1F6	860 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SART1	O43290	800 aa	Known RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ALDH5A1	P51649	535 aa	Predicted RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	YTHDF3	Q7Z739	585 aa	Known RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SPATA20	Q8TB22	786 aa		11.63	□□□□□ -0.55

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