RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FBXO18Q8NFZ0 1043 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 PAWRQ96IZ0 340 aaKnown RBP22.91■■□□□ 1.26
CTSD-206ENST00000497544 EHMT1Q9H9B1 1298 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 PCDHA6Q9UN73 950 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 PCDHA8Q9Y5H6 950 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 ASB14A6NK59 587 aa22.9■■□□□ 1.26
CTSD-206ENST00000497544 TFRCP02786 760 aaKnown RBP22.9■■□□□ 1.26
CTSD-206ENST00000497544 KRT2P35908 639 aa22.9■■□□□ 1.26
CTSD-206ENST00000497544 CLK2P49760 499 aaKnown RBP22.9■■□□□ 1.26
CTSD-206ENST00000497544 ALDH5A1P51649 535 aaPredicted RBP22.9■■□□□ 1.26
CTSD-206ENST00000497544 AP3B2Q13367 1082 aa22.9■■□□□ 1.26
CTSD-206ENST00000497544 PXMP2Q9NR77 195 aa22.9■■□□□ 1.26
CTSD-206ENST00000497544 TMEM260Q9NX78 707 aa22.9■■□□□ 1.26
CTSD-206ENST00000497544 ADAMTS3O15072 1205 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 SYN1P17600 705 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 CCL14Q16627 93 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 OLFML2BQ68BL8 750 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 SLAIN1Q8ND83 568 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 RASGRP4Q8TDF6 673 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 DIS3LQ8TF46 1054 aaKnown RBP22.89■■□□□ 1.25
CTSD-206ENST00000497544 IWS1Q96ST2 819 aa22.89■■□□□ 1.25
CTSD-206ENST00000497544 LOC102724159A0A0B4J2E5 919 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 EIF2AK2P19525 551 aaKnown RBP22.88■■□□□ 1.25
CTSD-206ENST00000497544 PLA2G5P39877 138 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 GNL2Q13823 731 aaKnown RBP22.88■■□□□ 1.25
CTSD-206ENST00000497544 PWP2Q15269 919 aaKnown RBP22.88■■□□□ 1.25
CTSD-206ENST00000497544 NPY5RQ15761 445 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 MFSD14CQ5VZR4 134 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 DIS3L2Q8IYB7 885 aaKnown RBP22.88■■□□□ 1.25
CTSD-206ENST00000497544 MSL3Q8N5Y2 521 aaKnown RBP22.88■■□□□ 1.25
CTSD-206ENST00000497544 PXYLP1Q8TE99 480 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 PGBD1Q96JS3 809 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 FGD4Q96M96 766 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 DEFB118Q96PH6 123 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 TINF2Q9BSI4 451 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 FLRT1Q9NZU1 646 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 LCTP09848 1927 aa22.88■■□□□ 1.25
CTSD-206ENST00000497544 PDE4DQ08499 809 aa22.87■■□□□ 1.25
CTSD-206ENST00000497544 MAMDC4Q6UXC1 1216 aa22.87■■□□□ 1.25
CTSD-206ENST00000497544 OXER1Q8TDS5 423 aa22.87■■□□□ 1.25
CTSD-206ENST00000497544 PDCD2LQ9BRP1 358 aa22.87■■□□□ 1.25
CTSD-206ENST00000497544 ANO3Q9BYT9 981 aa22.87■■□□□ 1.25
CTSD-206ENST00000497544 MCM3APO60318 1980 aa22.87■■□□□ 1.25
CTSD-206ENST00000497544 CCDC194A0A1B0GVG4 234 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 BTBD18B2RXH4 712 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 NR3C2P08235 984 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 MYCLP12524 364 aaPredicted RBP22.86■■□□□ 1.25
CTSD-206ENST00000497544 ELNP15502 786 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 PGM5Q15124 567 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 MCTP1Q6DN14 999 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 FAM109BQ6ICB4 259 aaPredicted RBP22.86■■□□□ 1.25
CTSD-206ENST00000497544 ARMCX2Q7L311 632 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 KRT25Q7Z3Z0 450 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 TRIB2Q92519 343 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 FAM161BQ96MY7 647 aa22.86■■□□□ 1.25
CTSD-206ENST00000497544 UBE2OQ9C0C9 1292 aaKnown RBP22.86■■□□□ 1.25
CTSD-206ENST00000497544 ASTN1O14525 1302 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 M0R2N6 131 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 SYT1P21579 422 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 CYP2C19P33261 490 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 STXBP2Q15833 593 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 NECAB2Q7Z6G3 386 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 CRISPLD2Q9H0B8 497 aa22.85■■□□□ 1.25
CTSD-206ENST00000497544 SYNGAP1Q96PV0 1343 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 VPS37CA5D8V6 355 aaPredicted RBP22.84■■□□□ 1.25
CTSD-206ENST00000497544 HMGCRP04035 888 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 INHAP05111 366 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 PDIA4P13667 645 aaKnown RBP22.84■■□□□ 1.25
CTSD-206ENST00000497544 CAPN2P17655 700 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 CCND2P30279 289 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 NR5A1Q13285 461 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 NONOQ15233 471 aaKnown RBP eCLIP22.84■■□□□ 1.25
CTSD-206ENST00000497544 MORC4Q8TE76 937 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 FOXP1Q9H334 677 aaPredicted RBP22.84■■□□□ 1.25
CTSD-206ENST00000497544 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.84■■□□□ 1.25
CTSD-206ENST00000497544 CNPY2Q9Y2B0 182 aa22.84■■□□□ 1.25
CTSD-206ENST00000497544 SNAI1O95863 264 aaPredicted RBP22.83■■□□□ 1.25
CTSD-206ENST00000497544 EDNRBP24530 442 aa22.83■■□□□ 1.25
CTSD-206ENST00000497544 SREBF1P36956 1147 aa22.83■■□□□ 1.25
CTSD-206ENST00000497544 XRRA1Q6P2D8 792 aa22.83■■□□□ 1.25
CTSD-206ENST00000497544 PIK3AP1Q6ZUJ8 805 aa22.83■■□□□ 1.25
CTSD-206ENST00000497544 EEPD1Q7L9B9 569 aa22.83■■□□□ 1.25
CTSD-206ENST00000497544 VSIG10LQ86VR7 867 aa22.83■■□□□ 1.25
CTSD-206ENST00000497544 PAK6Q9NQU5 681 aaPredicted RBP22.83■■□□□ 1.25
CTSD-206ENST00000497544 FRMPD4Q14CM0 1322 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 STX6O43752 255 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 EIF3JO75822 258 aaKnown RBP22.82■■□□□ 1.24
CTSD-206ENST00000497544 ZNF76P36508 570 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 ARHGAP4P98171 946 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 PRAMEF19Q5SWL8 479 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 PCNX4Q63HM2 1172 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 TBCKQ8TEA7 893 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 ABHD16BQ9H3Z7 469 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 DDX49Q9Y6V7 483 aaKnown RBP22.82■■□□□ 1.24
CTSD-206ENST00000497544 MYH7BA7E2Y1 1941 aa22.82■■□□□ 1.24
CTSD-206ENST00000497544 IL31RAQ8NI17 732 aa22.81■■□□□ 1.24
CTSD-206ENST00000497544 TNFRSF25Q93038 417 aa22.81■■□□□ 1.24
CTSD-206ENST00000497544 STAM2O75886 525 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 IGHA2P01877 340 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 U2AF2P26368 475 aaKnown RBP eCLIP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms