RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 SIGLEC10Q96LC7 697 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 CDK11AQ9UQ88 783 aaPredicted RBP7.4□□□□□ -1.22
SNX13-211ENST00000496855 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 ZBTB7AO95365 584 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 FBLN1P23142 703 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 NCKAP1LP55160 1127 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 LINC00310P59036 64 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 FAM209AQ5JX71 171 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 STYK1Q6J9G0 422 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 KCNT2Q6UVM3 1135 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
SNX13-211ENST00000496855 ZFYVE21Q9BQ24 234 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 LNPKQ9C0E8 428 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 CLDND1Q9NY35 253 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
SNX13-211ENST00000496855 IRAK3Q9Y616 596 aa7.39□□□□□ -1.23
SNX13-211ENST00000496855 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 IRS4O14654 1257 aaPredicted RBP7.38□□□□□ -1.23
SNX13-211ENST00000496855 SLC6A11P48066 632 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
SNX13-211ENST00000496855 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
SNX13-211ENST00000496855 DPH6Q7L8W6 267 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 ALG3Q92685 438 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 EXOC2Q96KP1 924 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 TOX2Q96NM4 488 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 CDIP1Q9H305 208 aa7.38□□□□□ -1.23
SNX13-211ENST00000496855 CNOT6Q9ULM6 557 aaKnown RBP7.38□□□□□ -1.23
SNX13-211ENST00000496855 SGSM2O43147 1006 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 SSPNQ14714 243 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 TARBP2Q15633 366 aaKnown RBP7.37□□□□□ -1.23
SNX13-211ENST00000496855 ZC3H12BQ5HYM0 836 aaKnown RBP7.37□□□□□ -1.23
SNX13-211ENST00000496855 LBX2Q6XYB7 198 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 JMYQ8N9B5 988 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 SEC14L1Q92503 715 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 DHRS4Q9BTZ2 278 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 RNF38Q9H0F5 515 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 BCAS3Q9H6U6 928 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 ZSWIM4Q9H7M6 989 aa7.37□□□□□ -1.23
SNX13-211ENST00000496855 BUB1BO60566 1050 aaPredicted RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 ASGR2P07307 311 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 PFKLP17858 780 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 CFPP27918 469 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 GPR85P60893 370 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 CCDC144BQ3MJ40 725 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 IFNL3Q8IZI9 196 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 THAP3Q8WTV1 239 aaPredicted RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 KCTD3Q9Y597 815 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 ASXL2Q76L83 1435 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 C6orf222P0C671 652 aaPredicted RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 NCAM1P13591 858 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 PI3P19957 117 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 IGFBP6P24592 240 aaPredicted RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 PMLP29590 882 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 JAG1P78504 1218 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 KIZQ2M2Z5 673 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 LRRC56Q8IYG6 542 aaPredicted RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 TMEFF1Q8IYR6 380 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNX13-211ENST00000496855 MRFAP1L1Q96HT8 127 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 EPB41L1Q9H4G0 881 aa7.36□□□□□ -1.23
SNX13-211ENST00000496855 PPARGC1AQ9UBK2 798 aaKnown RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 MRPS23Q9Y3D9 190 aaKnown RBP7.36□□□□□ -1.23
SNX13-211ENST00000496855 RFXAPO00287 272 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 DGKIO75912 1065 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 ZNF385BQ569K4 471 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 C2orf27AQ580R0 203 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 CIAPIN1Q6FI81 312 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 MAMDC2Q7Z304 686 aaPredicted RBP7.35□□□□□ -1.23
SNX13-211ENST00000496855 C1QL4Q86Z23 238 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 PTPRN2Q92932 1015 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 KISS1RQ969F8 398 aaPredicted RBP7.35□□□□□ -1.23
SNX13-211ENST00000496855 PALD1Q9ULE6 856 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 TRAF6Q9Y4K3 522 aa7.35□□□□□ -1.23
SNX13-211ENST00000496855 NUAK1O60285 661 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 ATF2P15336 505 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 GRK2P25098 689 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 GRK3P35626 688 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 CHRNA2Q15822 529 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 MILR1Q7Z6M3 343 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 ZSWIM2Q8NEG5 633 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 ZSCAN18Q8TBC5 510 aaPredicted RBP7.34□□□□□ -1.23
SNX13-211ENST00000496855 PANK1Q8TE04 598 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.34□□□□□ -1.23
SNX13-211ENST00000496855 CPA5Q8WXQ8 436 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 JAM3Q9BX67 310 aa7.34□□□□□ -1.23
SNX13-211ENST00000496855 EPB41L4AQ9HCS5 686 aaPredicted RBP7.34□□□□□ -1.23
SNX13-211ENST00000496855 AQP7O14520 342 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 HGSO14964 777 aaPredicted RBP7.33□□□□□ -1.24
SNX13-211ENST00000496855 MC3RP41968 323 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 GABREP78334 506 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 EMC4Q5J8M3 183 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 STEAP3Q658P3 488 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 FAM129CQ86XR2 697 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 ZNF652Q9Y2D9 606 aa7.33□□□□□ -1.24
SNX13-211ENST00000496855 PTCH2Q9Y6C5 1203 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms