RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 CNPY2Q9Y2B0 182 aa11.32□□□□□ -0.6
C4A-258ENST00000496659 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
C4A-258ENST00000496659 MORC2Q9Y6X9 1032 aaPredicted RBP11.32□□□□□ -0.6
C4A-258ENST00000496659 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
C4A-258ENST00000496659 ELP1O95163 1332 aa11.32□□□□□ -0.6
C4A-258ENST00000496659 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 GOLGA6L4A6NEF3 574 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 ASB14A6NK59 587 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 SPTLC2O15270 562 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 PPP6R2O75170 966 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 CYP3A7P24462 503 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 CIITAP33076 1130 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 RGS2P41220 211 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 CEBPZQ03701 1054 aaKnown RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 PDE4DQ08499 809 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 SLC39A14Q15043 492 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 ZNF174Q15697 407 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 STXBP2Q15833 593 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 TMEM266Q2M3C6 531 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 Q4G0T1 1027 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 ARL6IP4Q66PJ3 421 aaKnown RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 OTOP1Q7RTM1 612 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 NIPA1Q7RTP0 329 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 FAM133AQ8N9E0 248 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 LEO1Q8WVC0 666 aaPredicted RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 CRYGNQ8WXF5 182 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 FERMT2Q96AC1 680 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 CDHR1Q96JP9 859 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 TAAR1Q96RJ0 339 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 TCEAL9Q9UHQ7 104 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 DIS3Q9Y2L1 958 aaKnown RBP11.31□□□□□ -0.6
C4A-258ENST00000496659 PCDHB6Q9Y5E3 794 aa11.31□□□□□ -0.6
C4A-258ENST00000496659 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 TBX3O15119 743 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 MAFGO15525 162 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 TDP2O95551 362 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 GNRH1P01148 92 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 PGK2P07205 417 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 NR3C2P08235 984 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 OR52Z1P0C646 297 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
C4A-258ENST00000496659 HOXD10P28358 340 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 PRPHP41219 470 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 ME1P48163 572 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 UBXN2AP68543 259 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
C4A-258ENST00000496659 MAP2K5Q13163 448 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 NBR1Q14596 966 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 CALCRLQ16602 461 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 SLFN12Q8IYM2 578 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 MSL3Q8N5Y2 521 aaKnown RBP11.3□□□□□ -0.6
C4A-258ENST00000496659 TMEM87AQ8NBN3 555 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 LINC00301Q8NCQ3 95 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 APBA2Q99767 749 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
C4A-258ENST00000496659 CLIC4Q9Y696 253 aa11.3□□□□□ -0.6
C4A-258ENST00000496659 CNTN2Q02246 1040 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 PTGDRQ13258 359 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 MTMR1Q13613 665 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 PRR16Q569H4 304 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 PLA2G4DQ86XP0 818 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 TRMT44Q8IYL2 757 aaKnown RBP11.29□□□□□ -0.6
C4A-258ENST00000496659 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
C4A-258ENST00000496659 GPRASP2Q96D09 838 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 FAM20AQ96MK3 541 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 MBOAT7Q96N66 472 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
C4A-258ENST00000496659 JADE2Q9NQC1 790 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 RCOR1Q9UKL0 485 aa11.29□□□□□ -0.6
C4A-258ENST00000496659 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
C4A-258ENST00000496659 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 CUTAO60888 179 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
C4A-258ENST00000496659 HOXC6P09630 235 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 EDNRBP24530 442 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 TXLNAP40222 546 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 PSMC4P43686 418 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 PTPAQ15257 358 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 MORN1Q5T089 497 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 VSIG10LQ86VR7 867 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 ARHGAP39Q9C0H5 1083 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 PTPN22Q9Y2R2 807 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
C4A-258ENST00000496659 IGLV3-22A0A075B6J6 115 aa11.27□□□□□ -0.61
C4A-258ENST00000496659 FAM86B1E9PN63 330 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms