RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 A1CFQ9NQ94 594 aaKnown RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 A0A1B0GUL6 1792 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 BCRP11274 1271 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 MCM7P33993 719 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 JAK3P52333 1124 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 SP4Q02446 784 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 CUL4AQ13619 759 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 EEPD1Q7L9B9 569 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 OR6J1Q8NGC5 347 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 TBCKQ8TEA7 893 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 RNF208Q9H0X6 261 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 STXBP3O00186 592 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SFNP31947 248 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SOX10P56693 466 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 UBE2SQ16763 222 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 INF2Q27J81 1249 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SHROOM1Q2M3G4 852 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 FAM47CQ5HY64 1035 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 USP17L6PQ6QN14 398 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CCDC155Q8N6L0 562 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 DAGLBQ8NCG7 672 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SYTL5Q8TDW5 730 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 PKD2L1Q9P0L9 805 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 BTBD7Q9P203 1132 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SSBP05455 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 PSAPP07602 524 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 JAG1P78504 1218 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 APBB1IPQ7Z5R6 666 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 PXYLP1Q8TE99 480 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SENP2Q9HC62 589 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CABYRO75952 493 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 RPLP2P05387 115 aaKnown RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 FOXD4L6Q3SYB3 417 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CEP55Q53EZ4 464 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 FOXD4L3Q6VB84 417 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 STXBP4Q6ZWJ1 553 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SIAH1Q8IUQ4 282 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CEP57L1Q8IYX8 460 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 FERMT2Q96AC1 680 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 SEZ6LQ9BYH1 1024 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CYP39A1Q9NYL5 469 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 RTEL1Q9NZ71 1219 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 TMOD1P28289 359 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 ALDH5A1P51649 535 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 CEBPZQ03701 1054 aaKnown RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 IRF5Q13568 498 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 ODR4Q5SWX8 454 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 ARMCX2Q7L311 632 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 GLT1D1Q96MS3 346 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 ZNF214Q9UL59 606 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-212ENST00000496462 PCDHA12Q9UN75 941 aa9.73□□□□□ -0.85
U2AF1-212ENST00000496462 PIK3CDO00329 1044 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 KIF20AO95235 890 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 PGK2P07205 417 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 SYT1P21579 422 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 OLFML2BQ68BL8 750 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 MOXD1Q6UVY6 613 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 DOCK2Q92608 1830 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 KDM3AQ9Y4C1 1321 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 BTBD18B2RXH4 712 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 NFIBO00712 420 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 MYL3P08590 195 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 ACVR2BQ13705 512 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 TAAR1Q96RJ0 339 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 NT5C3AQ9H0P0 336 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 TBX3O15119 743 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 OR52Z1P0C646 297 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 C6orf222P0C671 652 aaPredicted RBP9.72□□□□□ -0.85
U2AF1-212ENST00000496462 ZNF174Q15697 407 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 PCNX4Q63HM2 1172 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 NIPA1Q7RTP0 329 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 PDCD2LQ9BRP1 358 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 HTATIP2Q9BUP3 242 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 PXMP2Q9NR77 195 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 TRPC6Q9Y210 931 aa9.72□□□□□ -0.85
U2AF1-212ENST00000496462 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.85
U2AF1-212ENST00000496462 KINO60870 393 aaKnown RBP9.71□□□□□ -0.85
U2AF1-212ENST00000496462 F13A1P00488 732 aa9.71□□□□□ -0.85
U2AF1-212ENST00000496462 MAP7D2Q96T17 732 aa9.71□□□□□ -0.85
U2AF1-212ENST00000496462 PORCNQ9H237 461 aa9.71□□□□□ -0.85
U2AF1-212ENST00000496462 RTN4Q9NQC3 1192 aaKnown RBP9.71□□□□□ -0.85
U2AF1-212ENST00000496462 LRWD1Q9UFC0 647 aa9.71□□□□□ -0.85
U2AF1-212ENST00000496462 R3HCC1Q9Y3T6 440 aaKnown RBP9.71□□□□□ -0.85
U2AF1-212ENST00000496462 WDR64B1ANS9 1081 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
U2AF1-212ENST00000496462 TXKP42681 527 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 PRKCZQ05513 592 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 GRB14Q14449 540 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 NCAPH2Q6IBW4 605 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 RETREG2Q8NC44 543 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 RDM1Q8NG50 284 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms