RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	NSUN6	Q8TEA1	469 aa	Known RBP	18.28	■□□□□ 0.52
PRKCZ-222	ENST00000496325	PXMP2	Q9NR77	195 aa		18.28	■□□□□ 0.52
PRKCZ-222	ENST00000496325	MAP3K20	Q9NYL2	800 aa	Known RBP	18.28	■□□□□ 0.52
PRKCZ-222	ENST00000496325	GNE	Q9Y223	722 aa	Known RBP	18.28	■□□□□ 0.52
PRKCZ-222	ENST00000496325		V9GY48	417 aa	Predicted RBP	18.28	■□□□□ 0.52
PRKCZ-222	ENST00000496325	RBM47	A0AV96	593 aa	Known RBP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	CTAGE5	O15320	804 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	POLR2M	P0CAP2	368 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	PDIA3	P30101	505 aa	Known RBP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	GJA9	P57773	515 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	CCT2	P78371	535 aa	Known RBP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	ARHGEF16	Q5VV41	709 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	RNF180	Q86T96	592 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	FCHSD1	Q86WN1	690 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	SAMD3	Q8N6K7	520 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	NECAB3	Q96P71	396 aa	Predicted RBP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	UPF3A	Q9H1J1	476 aa	Known RBP	18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	PDRG1	Q9NUG6	133 aa		18.27	■□□□□ 0.52
PRKCZ-222	ENST00000496325	NID2	Q14112	1375 aa		18.27	■□□□□ 0.51
PRKCZ-222	ENST00000496325	C6orf222	P0C671	652 aa	Predicted RBP	18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	HOXD11	P31277	338 aa	Predicted RBP	18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PBX2	P40425	430 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ANAPC15	P60006	121 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	USP17L6P	Q6QN14	398 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	NOL8	Q76FK4	1167 aa	Known RBP	18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	IL31RA	Q8NI17	732 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ASB2	Q96Q27	587 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	IWS1	Q96ST2	819 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	MPHOSPH6	Q99547	160 aa	Known RBP	18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PDCD2L	Q9BRP1	358 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	WDR11	Q9BZH6	1224 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PHF24	Q9UPV7	400 aa		18.26	■□□□□ 0.51
PRKCZ-222	ENST00000496325	GRXCR1	A8MXD5	290 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325		B4DLN1	442 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	MEIS2	O14770	477 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	DYNC1LI2	O43237	492 aa	Predicted RBP	18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	NR3C2	P08235	984 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	MRPL12	P52815	198 aa	Known RBP	18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	BEX3	Q00994	111 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PPP2R5B	Q15173	497 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	KCNA10	Q16322	511 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	C1orf53	Q5VUE5	145 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	WWC2	Q6AWC2	1192 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TYW1B	Q6NUM6	668 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	HEATR3	Q7Z4Q2	680 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TIFA	Q96CG3	184 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	IL17RA	Q96F46	866 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ZFP91	Q96JP5	570 aa	Predicted RBP	18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PRDM12	Q9H4Q4	367 aa		18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	NCOA5	Q9HCD5	579 aa	Known RBP	18.25	■□□□□ 0.51
PRKCZ-222	ENST00000496325	GBF1	Q92538	1859 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PPFIA3	O75145	1194 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ARIH2	O95376	493 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CLTB	P09497	229 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	MYCL	P12524	364 aa	Predicted RBP	18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ADGRE1	Q14246	886 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PGM5	Q15124	567 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	STXBP2	Q15833	593 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CCDC85B	Q15834	202 aa	Predicted RBP	18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	NTRK3	Q16288	839 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	DUSP28	Q4G0W2	176 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	SEPT14	Q6ZU15	432 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TLK2	Q86UE8	772 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	COPS5	Q92905	334 aa		18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	UHRF1	Q96T88	793 aa	Predicted RBP	18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TSEN34	Q9BSV6	310 aa	Known RBP	18.24	■□□□□ 0.51
PRKCZ-222	ENST00000496325	BDP1	A6H8Y1	2624 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CCDC196	A0A1B0GTZ2	297 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325		A0A1W2PQ45	241 aa	Predicted RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325		A0A1W2PQY0	241 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	KIAA0355	O15063	1070 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PQBP1	O60828	265 aa	Known RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	EIF5B	O60841	1220 aa	Known RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CST5	P28325	142 aa	Predicted RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ACLY	P53396	1101 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	NKX3-2	P78367	333 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	FPGS	Q05932	587 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	UBE2S	Q16763	222 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	GNAS	Q5JWF2	1037 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	SMARCC2	Q8TAQ2	1214 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	SCFD2	Q8WU76	684 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PHKB	Q93100	1093 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ZNF274	Q96GC6	653 aa	Predicted RBP	18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PSTPIP2	Q9H939	334 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	THEG	Q9P2T0	379 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	REV3L	O60673	3130 aa		18.23	■□□□□ 0.51
PRKCZ-222	ENST00000496325	STXBP3	O00186	592 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PIK3CD	O00329	1044 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	EIF3J	O75822	258 aa	Known RBP	18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	RGS20	O76081	388 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ASGR1	P07306	291 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	RAG1	P15918	1043 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	STK3	Q13188	491 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PKN1	Q16512	942 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms