RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	CNOT11	Q9UKZ1	510 aa	Known RBP	4.24	□□□□□ -1.73
RAD50-208	ENST00000496204		X6R8D5	127 aa		4.24	□□□□□ -1.73
RAD50-208	ENST00000496204		B2RBV5	119 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	NOP56	O00567	594 aa	Known RBP	4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	SMAD7	O15105	426 aa	Known RBP	4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	ITGAV	P06756	1048 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	CYP2C8	P10632	490 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	CNR2	P34972	360 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	SLC6A11	P48066	632 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	MRM1	Q6IN84	353 aa	Known RBP	4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	ETV3L	Q6ZN32	361 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	ZNF227	Q86WZ6	799 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	FAM178B	Q8IXR5	827 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	PALD1	Q9ULE6	856 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	MRVI1	Q9Y6F6	885 aa		4.23	□□□□□ -1.73
RAD50-208	ENST00000496204	ITGB3	P05106	788 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	NAT2	P11245	290 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	RPL13	P26373	211 aa	Known RBP	4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	ETFB	P38117	255 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	BCL6	P41182	706 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	ITGA1	P56199	1179 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	GJA9	P57773	515 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	PRSS53	Q2L4Q9	553 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	CR1L	Q2VPA4	569 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	E4F1	Q66K89	784 aa	Predicted RBP	4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	IQCE	Q6IPM2	695 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	CEP68	Q76N32	757 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	STK32C	Q86UX6	486 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	KY	Q8NBH2	561 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	RCBTB1	Q8NDN9	531 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	SEC14L1	Q92503	715 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	C1orf159	Q96HA4	380 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	KRTAP3-1	Q9BYR8	98 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	CCSER2	Q9H7U1	834 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	BTG4	Q9NY30	223 aa		4.22	□□□□□ -1.73
RAD50-208	ENST00000496204	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.22	□□□□□ -1.73
RAD50-208	ENST00000496204		K7ESM1	405 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	SUSD5	O60279	629 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	LCP1	P13796	627 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	HOXC12	P31275	282 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	STAT5A	P42229	794 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	RPL11	P62913	178 aa	Known RBP	4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	MROH9	Q5TGP6	573 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	CD300LD	Q6UXZ3	194 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	TTLL7	Q6ZT98	887 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	MILR1	Q7Z6M3	343 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	FAM126B	Q8IXS8	530 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	DIO2	Q92813	273 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	PPP1R14A	Q96A00	147 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	AP5M1	Q9H0R1	490 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	CDIP1	Q9H305	208 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	ACTR10	Q9NZ32	417 aa		4.21	□□□□□ -1.74
RAD50-208	ENST00000496204	SMARCA5	O60264	1052 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	TADA3	O75528	432 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	ECI1	P42126	302 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	MAGEA10	P43363	369 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	GFRA1	P56159	465 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	RBM10	P98175	930 aa	Known RBP	4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	ADAM9	Q13443	819 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	RGL3	Q3MIN7	710 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	TTLL6	Q8N841	843 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	TMEM145	Q8NBT3	493 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	PCDH18	Q9HCL0	1135 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	PRKAG3	Q9UGI9	489 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	WASF3	Q9UPY6	502 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	ZNF652	Q9Y2D9	606 aa		4.2	□□□□□ -1.74
RAD50-208	ENST00000496204	MEFV	O15553	781 aa	Predicted RBP	4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	PLAT	P00750	562 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	SNRPB2	P08579	225 aa	Known RBP	4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	INSRR	P14616	1297 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	GRIA2	P42262	883 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	KCNAB2	Q13303	367 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	SV2C	Q496J9	727 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	TNNI3K	Q59H18	835 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	FAM26F	Q5R3K3	315 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	SLC35F1	Q5T1Q4	408 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	LARP1B	Q659C4	914 aa	Known RBP	4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	TXNDC5	Q8NBS9	432 aa	Known RBP	4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	ARRDC4	Q8NCT1	418 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	TRMT2B	Q96GJ1	504 aa	Known RBP	4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	TMEM169	Q96HH4	297 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	CCDC140	Q96MF4	163 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	KRTAP9-8	Q9BYQ0	159 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	NPFFR2	Q9Y5X5	522 aa		4.19	□□□□□ -1.74
RAD50-208	ENST00000496204	TCRBV5S2	A0A599	114 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	MROH6	A6NGR9	719 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204		H7BY64	318 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	DDX3X	O00571	662 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	HGS	O14964	777 aa	Predicted RBP	4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	CP	P00450	1065 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	LRG1	P02750	347 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	FGR	P09769	529 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	ZNF28	P17035	718 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	LTBR	P36941	435 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	GTF2A2	P52657	109 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 104 ms