RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 KCNJ14Q9UNX9 436 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 MYH7BA7E2Y1 1941 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 CCDC85CA6NKD9 419 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 MSCO60682 206 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 AKR1A1P14550 325 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 EDNRBP24530 442 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-207ENST00000496202 GNL2Q13823 731 aaKnown RBP11.05□□□□□ -0.64
PRPF3-207ENST00000496202 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 IL31RAQ8NI17 732 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 PGBD1Q96JS3 809 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 PHF20Q9BVI0 1012 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 TMEM260Q9NX78 707 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
PRPF3-207ENST00000496202 FRMPD4Q14CM0 1322 aa11.05□□□□□ -0.64
PRPF3-207ENST00000496202 CCDC194A0A1B0GVG4 234 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 SEPT4O43236 478 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 EIF3JO75822 258 aaKnown RBP11.04□□□□□ -0.64
PRPF3-207ENST00000496202 STAM2O75886 525 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 IGHA2P01877 340 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 RARBP10826 455 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 GJB2P29033 226 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 KRT2P35908 639 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 ZNF76P36508 570 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 CLK2P49760 499 aaKnown RBP11.04□□□□□ -0.64
PRPF3-207ENST00000496202 GUCY1B3Q02153 619 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 CUL4AQ13619 759 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 BECN1Q14457 450 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 CCDC144BQ3MJ40 725 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 PCNX4Q63HM2 1172 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 KRT40Q6A162 431 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 SEPT14Q6ZU15 432 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 SCFD2Q8WU76 684 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 SHISA4Q96DD7 197 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 DEFB118Q96PH6 123 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 GJB4Q9NTQ9 266 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 DDX20Q9UHI6 824 aaKnown RBP11.04□□□□□ -0.64
PRPF3-207ENST00000496202 FRMPD3Q5JV73 1810 aa11.04□□□□□ -0.64
PRPF3-207ENST00000496202 H3BQV1 296 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 MMP1P03956 469 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 GJB1P08034 283 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 ZNF865P0CJ78 1059 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-207ENST00000496202 SREBF1P36956 1147 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 ARHGAP4P98171 946 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 TTLL4Q14679 1199 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 NONOQ15233 471 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRPF3-207ENST00000496202 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 NLRX1Q86UT6 975 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 VSIG10LQ86VR7 867 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 DIS3L2Q8IYB7 885 aaKnown RBP11.03□□□□□ -0.64
PRPF3-207ENST00000496202 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
PRPF3-207ENST00000496202 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 SPC25Q9HBM1 224 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-207ENST00000496202 MRVI1Q9Y6F6 885 aa11.03□□□□□ -0.64
PRPF3-207ENST00000496202 TFRCP02786 760 aaKnown RBP11.02□□□□□ -0.65
PRPF3-207ENST00000496202 PDCP20941 246 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 ADCYAP1R1P41586 468 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 ANO1Q5XXA6 986 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 TAPT1Q6NXT6 567 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 KCNV1Q6PIU1 500 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 FBXO18Q8NFZ0 1043 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 U2AF1L4Q8WU68 220 aaKnown RBP11.02□□□□□ -0.65
PRPF3-207ENST00000496202 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-207ENST00000496202 CDHR1Q96JP9 859 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 KATNBL1Q9H079 304 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 AP5M1Q9H0R1 490 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 XPNPEP3Q9NQH7 507 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 PDGFCQ9NRA1 345 aa11.02□□□□□ -0.65
PRPF3-207ENST00000496202 CENPFP49454 3210 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 RBM47A0AV96 593 aaKnown RBP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 FIBPO43427 364 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 DUSP11O75319 330 aaKnown RBP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 TXNP10599 105 aaKnown RBP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 CAPN2P17655 700 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 GJA8P48165 433 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 SOX10P56693 466 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 NPY5RQ15761 445 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 MCTP1Q6DN14 999 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 TLK2Q86UE8 772 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 TBCKQ8TEA7 893 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 LENG1Q96BZ8 264 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 INPP4AQ96PE3 977 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-207ENST00000496202 RTEL1Q9NZ71 1219 aa11.01□□□□□ -0.65
PRPF3-207ENST00000496202 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
PRPF3-207ENST00000496202 VPS37CA5D8V6 355 aaPredicted RBP11□□□□□ -0.65
PRPF3-207ENST00000496202 BTBD18B2RXH4 712 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms